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The map label for this gene is ycbW [H]

Identifier: 227081649

GI number: 227081649

Start: 1543602

End: 1544144

Strand: Reverse

Name: ycbW [H]

Synonym: VCM66_1433

Alternate gene names: 227081649

Gene position: 1544144-1543602 (Counterclockwise)

Preceding gene: 227081650

Following gene: 227081648

Centisome position: 53.38

GC content: 44.75

Gene sequence:

>543_bases
ATGCTTAAACCAAGTGACAAATGGAGTTGGTACTTCTCAGATAGCGAAGGTTATCTGATGCTCAACCTTGGTGATGATAT
GCTGTTTCGTACCAATCTCAGTCGCAATCTTTTGGTGGATTGTGCATTCATCGAGAACCCCTTCACCGTAGATGACGCTT
CTGATTTTCAGTTGTACAAAGAACACATTGCCTGTCTACCTCTGAGTGAGCCTCGTAAAGCGGAGTTGGCGCTGTACTGT
GTGGCCGCAAAACGCTTCCACAAACCCGTACAGCCTAAAAGCTGGTTTTTTGATGTACAGGGAACCGGTTATACCCCACA
ACAAGGTCAGCTGATATCTCTACGAAACTCCCTTAACAGCGGTATTTTTATTGCGTTAGAAGTGGGGGAGAACGCCACTC
TTTGCGCGTACAGTGATTTGGTTTCTTTTGCTTTAAACGGCAGCAAAACACTGGAATTTGGTCAAGTGATTAAAGTGATG
CACGACAGAATGTCGGATGTGAATACACTTTTGTATACACCCCAAATGGCCATGGTCAGTTAA

Upstream 100 bases:

>100_bases
TTTTTTTCTCTGCACCTTCATAGAATTACTGATATTCATAGGCAAGGGTAGGTCACATAGCTTACCTCATCCTCCCAAAT
GTATCGTTGAGAGTGGAACA

Downstream 100 bases:

>100_bases
TTTTTTATTCAACATTCGTTCCTTTCCTATTTCGTTCCTTCATTTCTTATCGGCGTAAGCCGATTTTTTTTGCCTTTAAA
TCGAGCTAATTCGTTAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLKPSDKWSWYFSDSEGYLMLNLGDDMLFRTNLSRNLLVDCAFIENPFTVDDASDFQLYKEHIACLPLSEPRKAELALYC
VAAKRFHKPVQPKSWFFDVQGTGYTPQQGQLISLRNSLNSGIFIALEVGENATLCAYSDLVSFALNGSKTLEFGQVIKVM
HDRMSDVNTLLYTPQMAMVS

Sequences:

>Translated_180_residues
MLKPSDKWSWYFSDSEGYLMLNLGDDMLFRTNLSRNLLVDCAFIENPFTVDDASDFQLYKEHIACLPLSEPRKAELALYC
VAAKRFHKPVQPKSWFFDVQGTGYTPQQGQLISLRNSLNSGIFIALEVGENATLCAYSDLVSFALNGSKTLEFGQVIKVM
HDRMSDVNTLLYTPQMAMVS
>Mature_180_residues
MLKPSDKWSWYFSDSEGYLMLNLGDDMLFRTNLSRNLLVDCAFIENPFTVDDASDFQLYKEHIACLPLSEPRKAELALYC
VAAKRFHKPVQPKSWFFDVQGTGYTPQQGQLISLRNSLNSGIFIALEVGENATLCAYSDLVSFALNGSKTLEFGQVIKVM
HDRMSDVNTLLYTPQMAMVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=166, Percent_Identity=33.7349397590361, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20355; Mature: 20355

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPSDKWSWYFSDSEGYLMLNLGDDMLFRTNLSRNLLVDCAFIENPFTVDDASDFQLYK
CCCCCCCEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHH
EHIACLPLSEPRKAELALYCVAAKRFHKPVQPKSWFFDVQGTGYTPQQGQLISLRNSLNS
HHHEECCCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCC
GIFIALEVGENATLCAYSDLVSFALNGSKTLEFGQVIKVMHDRMSDVNTLLYTPQMAMVS
CEEEEEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHCC
>Mature Secondary Structure
MLKPSDKWSWYFSDSEGYLMLNLGDDMLFRTNLSRNLLVDCAFIENPFTVDDASDFQLYK
CCCCCCCEEEEEECCCCEEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHH
EHIACLPLSEPRKAELALYCVAAKRFHKPVQPKSWFFDVQGTGYTPQQGQLISLRNSLNS
HHHEECCCCCCCCCEEEEEEEEHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCC
GIFIALEVGENATLCAYSDLVSFALNGSKTLEFGQVIKVMHDRMSDVNTLLYTPQMAMVS
CEEEEEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]