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The map label for this gene is 227081626

Identifier: 227081626

GI number: 227081626

Start: 1522395

End: 1523087

Strand: Reverse

Name: 227081626

Synonym: VCM66_1410

Alternate gene names: NA

Gene position: 1523087-1522395 (Counterclockwise)

Preceding gene: 227081627

Following gene: 227081625

Centisome position: 52.66

GC content: 50.36

Gene sequence:

>693_bases
ATGAACTTGAATCAACTCACGGGTGCAGACCTCATGGCTGCACGTACACACATCGGCCTCAGCATCTCAGCCGTGGCGAA
ACTCACCGGAATCAACCGCAATACTCTTAGCCAGTTCGAGCAAGAAAAGGCCTCGTTAAGCGGCTCTGAAAAGAAACGAC
TTGCAGGTTGTTACGAAGAGCGCGGTTATCACTTCGATGAACCTCAGACCACCGACGAAACCGTGTTAGCCACACGCTAC
GATGATGCGCGTGAACGCCTTGTTGATGCAGCGTACGACGTTAACATGAATGGGCTAGGTGAGGCGGTTCTCGCTTTGGC
CGATGCAAGCCATGACTTGTTGTCTATGTTGGCGCGCCCAATGGATGTGGCACAAGAAGAGGTTGAGCTAGATGCTGTTG
AGCTGCCAGAGTCATATCTGGAAATGCATAACGTGCTACAACGTCACTTCTTGGCGGACAAGGCAGGGCAGATGCAAGGT
AAAGTGGGCTTCTTTAAAGAAGATGCGGACGAACGCAGTGCTAAGCTGATAGCTTACATGGCACAACAATACTTAACACT
GTTACATGCTGAAATGCCGGAAGTGGTGAGTCTTGAGCGTGACAGTCTGGATGATGACAGCGATAACGCTCGCGTATTGG
ATGCACTGGCGAACTGGACATTCTATGACGCTTTAAAGGAAATGACGGTGTAA

Upstream 100 bases:

>100_bases
TCATGCAGTCGCATGCAACTGCCAATACCTGCATGCAATACCAAGCAACCGCCTATGTAACGTTATCTATATAGGCATCA
CTCGATAAAAGGAAACACAA

Downstream 100 bases:

>100_bases
AGCAAAGCGGTAAAGTGAACTGACTTATGGGCGTAAGTCAGTTCATGCACTGAAATTCAAGCGATAAGGCAGAACCAATG
CAGGGACATCATACAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEERGYHFDEPQTTDETVLATRY
DDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARPMDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQG
KVGFFKEDADERSAKLIAYMAQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV

Sequences:

>Translated_230_residues
MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEERGYHFDEPQTTDETVLATRY
DDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARPMDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQG
KVGFFKEDADERSAKLIAYMAQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV
>Mature_230_residues
MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEERGYHFDEPQTTDETVLATRY
DDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARPMDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQG
KVGFFKEDADERSAKLIAYMAQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25652; Mature: 25652

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEE
CCCCHHCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RGYHFDEPQTTDETVLATRYDDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARP
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH
MDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQGKVGFFKEDADERSAKLIAYM
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLNQLTGADLMAARTHIGLSISAVAKLTGINRNTLSQFEQEKASLSGSEKKRLAGCYEE
CCCCHHCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RGYHFDEPQTTDETVLATRYDDARERLVDAAYDVNMNGLGEAVLALADASHDLLSMLARP
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHH
MDVAQEEVELDAVELPESYLEMHNVLQRHFLADKAGQMQGKVGFFKEDADERSAKLIAYM
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AQQYLTLLHAEMPEVVSLERDSLDDDSDNARVLDALANWTFYDALKEMTV
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA