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The map label for this gene is 227081616

Identifier: 227081616

GI number: 227081616

Start: 1497681

End: 1498898

Strand: Direct

Name: 227081616

Synonym: VCM66_1400

Alternate gene names: NA

Gene position: 1497681-1498898 (Clockwise)

Preceding gene: 227081615

Following gene: 227081617

Centisome position: 51.78

GC content: 43.1

Gene sequence:

>1218_bases
GTGTCATCTCACGTATACAAAACTCGTTCAATGCGGCTAAAAACAACCGTTTCTACTCAAGTTGATGTCTATTCTTGTAT
CCATGAACTACAACAGTCTATGGATAGTAATGGTTTATCGAATTTAATCTGCTATTTCACTGAAGAATACGATGCTCAAC
TTTTATCCTCAATGTTAAAAGCGGCATTTCCCGGCATTCCAATTATCGGATGTTCTTCCTGTCGTGGTGTGATGACGCAA
GATGGGTATTTTTCCAATCCGGCAGTGGGAATCATGGGGATTTATGATAGTCCTCAGGCTGCTTACGGCACGGCATTGAT
CTCTCTTTGCGATAATCGCCCCATCCCTGAGTTAATTGATCAAGCGATTGATAATGCACTAGAAAGTGCCGATAGAACGG
GAGAGTTACCTAGTCTTGTGCTTTTGCATGCCACCCCCGGTATTGAAGAAGTTTTGATTGAAGGAATCGATAACAAGTTT
GGCTCTCAAGTCCCCATTATTGGCGGGAGTGCTGCGGATAATTTCATCAGTCAAAATTGGTCTATCTTCACGCAGGAAGG
TGCTACCGATAAAGGCATTGCATTGCAATTGATGTTTCCATCGCAGTCGGTTTTTGGTGGATTCAGCGCTGGGTATTCTC
CAACCGAATTTTCTGGTGTGATCACGAAAGCCAAAGGTCGAGTGATTGAGGAAATTGATAACGAATCGGCCAGTGGACTT
TATAAAGAGTGGATTGGGGATCACTCAGGAATTCAAATCACGGAACAGTACCTTTTCGAACATGTGACTCGGTTTCCTTT
AGGGAGAGTGGTGGGAAAGGAGGAGAGCTGTTCAACGCAATATAAGCTTACTCACCCCGTGAGAAGGACTGAAAATGGCG
GGCTAGAAATGTTTGCGAATGTGGAAGTCGGAGAGCAAGTAAGCTTGATGACGGGATCGCAAAATCAGCTTATTGAACGT
GTGACGCGCGTTATTCAGGAAGCGAGTTATAAAAGTTACCAAGATCGGGCGTTATTTGGTTCTTTAACTATATTCTGTGC
TGGTTCCATGTTGAGGCTTGGTCAAGATATACATAAGGTTCAACAGAAAATAATGGAGCAGCTCAATGGTTGCGCTTTTA
TTTGTCCCTTCACTTTTGGAGAGCAAGGCCGTTTTATTAATGGTGAAAATGCGCACGGTAACTTAATGATTTCTTCTGTT
GTATTTTATGAGGCATGA

Upstream 100 bases:

>100_bases
GCATCACACTAAAACTGCGTTACCTACCGTAGAATCATCACTCAACGCCTAAACCATAGATTGGCGCTATTTAAACACTC
CGATATATCAGGTATAAATA

Downstream 100 bases:

>100_bases
AAATGGATTCTGAATACACAGAGAAAGTAAATGAATTGACTCTTGAGTTACAAAGAAGCATTGAACGAGGAAAACAGCTT
GCAGAAGAGAATAGGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSSHVYKTRSMRLKTTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSCRGVMTQ
DGYFSNPAVGIMGIYDSPQAAYGTALISLCDNRPIPELIDQAIDNALESADRTGELPSLVLLHATPGIEEVLIEGIDNKF
GSQVPIIGGSAADNFISQNWSIFTQEGATDKGIALQLMFPSQSVFGGFSAGYSPTEFSGVITKAKGRVIEEIDNESASGL
YKEWIGDHSGIQITEQYLFEHVTRFPLGRVVGKEESCSTQYKLTHPVRRTENGGLEMFANVEVGEQVSLMTGSQNQLIER
VTRVIQEASYKSYQDRALFGSLTIFCAGSMLRLGQDIHKVQQKIMEQLNGCAFICPFTFGEQGRFINGENAHGNLMISSV
VFYEA

Sequences:

>Translated_405_residues
MSSHVYKTRSMRLKTTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSCRGVMTQ
DGYFSNPAVGIMGIYDSPQAAYGTALISLCDNRPIPELIDQAIDNALESADRTGELPSLVLLHATPGIEEVLIEGIDNKF
GSQVPIIGGSAADNFISQNWSIFTQEGATDKGIALQLMFPSQSVFGGFSAGYSPTEFSGVITKAKGRVIEEIDNESASGL
YKEWIGDHSGIQITEQYLFEHVTRFPLGRVVGKEESCSTQYKLTHPVRRTENGGLEMFANVEVGEQVSLMTGSQNQLIER
VTRVIQEASYKSYQDRALFGSLTIFCAGSMLRLGQDIHKVQQKIMEQLNGCAFICPFTFGEQGRFINGENAHGNLMISSV
VFYEA
>Mature_404_residues
SSHVYKTRSMRLKTTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLKAAFPGIPIIGCSSCRGVMTQD
GYFSNPAVGIMGIYDSPQAAYGTALISLCDNRPIPELIDQAIDNALESADRTGELPSLVLLHATPGIEEVLIEGIDNKFG
SQVPIIGGSAADNFISQNWSIFTQEGATDKGIALQLMFPSQSVFGGFSAGYSPTEFSGVITKAKGRVIEEIDNESASGLY
KEWIGDHSGIQITEQYLFEHVTRFPLGRVVGKEESCSTQYKLTHPVRRTENGGLEMFANVEVGEQVSLMTGSQNQLIERV
TRVIQEASYKSYQDRALFGSLTIFCAGSMLRLGQDIHKVQQKIMEQLNGCAFICPFTFGEQGRFINGENAHGNLMISSVV
FYEA

Specific function: Unknown

COG id: COG3287

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44389; Mature: 44258

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHVYKTRSMRLKTTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLK
CCCCEEEHHCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHH
AAFPGIPIIGCSSCRGVMTQDGYFSNPAVGIMGIYDSPQAAYGTALISLCDNRPIPELID
HHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHH
QAIDNALESADRTGELPSLVLLHATPGIEEVLIEGIDNKFGSQVPIIGGSAADNFISQNW
HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHCCC
SIFTQEGATDKGIALQLMFPSQSVFGGFSAGYSPTEFSGVITKAKGRVIEEIDNESASGL
EEEEECCCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCHH
YKEWIGDHSGIQITEQYLFEHVTRFPLGRVVGKEESCSTQYKLTHPVRRTENGGLEMFAN
HHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCHHHCCCCCEEEEEE
VEVGEQVSLMTGSQNQLIERVTRVIQEASYKSYQDRALFGSLTIFCAGSMLRLGQDIHKV
CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQKIMEQLNGCAFICPFTFGEQGRFINGENAHGNLMISSVVFYEA
HHHHHHHHCCCEEEEECCCCCCCCEECCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
SSHVYKTRSMRLKTTVSTQVDVYSCIHELQQSMDSNGLSNLICYFTEEYDAQLLSSMLK
CCCEEEHHCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHH
AAFPGIPIIGCSSCRGVMTQDGYFSNPAVGIMGIYDSPQAAYGTALISLCDNRPIPELID
HHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHH
QAIDNALESADRTGELPSLVLLHATPGIEEVLIEGIDNKFGSQVPIIGGSAADNFISQNW
HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHCCC
SIFTQEGATDKGIALQLMFPSQSVFGGFSAGYSPTEFSGVITKAKGRVIEEIDNESASGL
EEEEECCCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCHH
YKEWIGDHSGIQITEQYLFEHVTRFPLGRVVGKEESCSTQYKLTHPVRRTENGGLEMFAN
HHHHCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCHHHCCCCCEEEEEE
VEVGEQVSLMTGSQNQLIERVTRVIQEASYKSYQDRALFGSLTIFCAGSMLRLGQDIHKV
CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQKIMEQLNGCAFICPFTFGEQGRFINGENAHGNLMISSVVFYEA
HHHHHHHHCCCEEEEECCCCCCCCEECCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA