| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cheY-1 [H]
Identifier: 227081566
GI number: 227081566
Start: 1443876
End: 1444256
Strand: Reverse
Name: cheY-1 [H]
Synonym: VCM66_1350
Alternate gene names: 227081566
Gene position: 1444256-1443876 (Counterclockwise)
Preceding gene: 227081567
Following gene: 227081565
Centisome position: 49.93
GC content: 42.52
Gene sequence:
>381_bases ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
Upstream 100 bases:
>100_bases CTAATGTTTGAGAAGCCTCGCGTGACTGTGTTGCCCAATGATCCCGAACTTAAAGTTTGGTTATCGGCGGCCAACATCAT CGGAAAAGGAGAAAATAATA
Downstream 100 bases:
>100_bases GGTCGTTATGATTCGTTACCTATTTGAACGGCTAGAGAATAATAAAAAACGCTATCTTTTCTTCACTATCACTCTAAGCT GCACAGTGCTTCTGTTGGGC
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
Sequences:
>Translated_126_residues MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS >Mature_125_residues SKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPIL VLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=39.8305084745763, Blast_Score=85, Evalue=1e-18, Organism=Escherichia coli, GI1788713, Length=117, Percent_Identity=38.4615384615385, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1787487, Length=108, Percent_Identity=37.962962962963, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=31.6239316239316, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1789149, Length=124, Percent_Identity=28.2258064516129, Blast_Score=61, Evalue=2e-11, Organism=Escherichia coli, GI1790437, Length=122, Percent_Identity=30.327868852459, Blast_Score=59, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13674; Mature: 13543
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRM CCCCEEEEECCCEEEEEHHHHHHHHCCEEEHHCCCCCCHHHCCCCEEEEEEEEECCCCCC DGIELISKIRAIASYRFTPILVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQV CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH LPGSIS CCCCCC >Mature Secondary Structure SKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRM CCCEEEEECCCEEEEEHHHHHHHHCCEEEHHCCCCCCHHHCCCCEEEEEEEEECCCCCC DGIELISKIRAIASYRFTPILVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQV CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHH LPGSIS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]