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The map label for this gene is yegD [H]

Identifier: 227081557

GI number: 227081557

Start: 1435119

End: 1436471

Strand: Direct

Name: yegD [H]

Synonym: VCM66_1341

Alternate gene names: 227081557

Gene position: 1435119-1436471 (Clockwise)

Preceding gene: 227081555

Following gene: 227081558

Centisome position: 49.61

GC content: 52.77

Gene sequence:

>1353_bases
ATGTTTATTGGATTTGACTATGGTACGGCCAACTGCTCGGTAGCGAGCATGCAGGATGGCAGGCCTGTGCTGATCCCACT
TGAAGGTGACAGCCTCTATATTCCTTCGACACTCGCCGCGCCCACGCGTGAGTCGGTGTCTGAACATCTATTTCGCCATC
GTCACATTGCCCCAGCGGATGCACTCGGTGAGCAACTTCTGCGTCGTTCGGTGGCGTCTAATCGTGAAGAAGGCATTGAT
TTACAGTTTGCTGATGTGGTGTTTGGTCAGGCGGCGCTTGATCTCTATCTCTCCGATCCCCATGAAGTGTATTACGTGAA
ATCGCCCAAATCCTTTTTGGGGGCGATGGGGTTACACGACATTCAACTGAGCTTTTTTGAAGATCTGGTGTGCGCCATGA
TGGCCAACATCAAAGCACAAGCAGAAGCTCACTCCGATGCAGTGATTCAGGATGCGGTGATTGGTCGTCCGGTCAATTTT
CATGGTCGGGGCGGGGAGGACTCTAACCAGCAAGCGGAAAATATTTTGCGCCGTGCGGCCACTCGCGCTGGTTTTCGTCA
TCTTGAGTTTCAGTTTGAGCCTGTCGCTGCTGGGCTAGAATACGAAGCCACACTGACCGAAGACAAAACCGTGTTAGTAG
TGGACATTGGCGGCGGTACCACCGACTGCTCACTTATTCAAATGGGGCCATCATGGCGCGGCAAAGCGGATCGCACGCAA
AGTCTGATTGCGCATACAGGTCAGCGCGTAGGCGGTAACGATCTCGATATTCATCTCGCTTTCAAAGCCCTGATGACGCC
CTTTGGTTTTGGCACTCAAACGCAAAGCGGGCTAGACATGCCGATCACCCAATTTTGGAATCCGATTGCGATTAACGATG
TGAGTGCGCAAGCCAAATTCTTTTCCCGTGAAAATTTGGCCGATTTAAAACGCCTGCACAAAGAGGCGCGTGAGCCGGAA
AAACTGGCGCGACTTCTGGCGGTCTATCACGATACTTTGGGTTACAGCCTTGTCAAAAAAGCCGAAGAGGCGAAGATTGC
GCTCTCTGACACGGCGCGAGCGATTGCGCAAATCAAAGTGCTATCCGAACTGCTAGAAGTTGAAATTCAACGCGAAGCGA
TGATCGAAGCGATTGACGTGCCCAAGACCAAAATGATTGAGTTGGTGACAGAAGCGGTGACGCTCGGCGGCGTGACGCCG
GATGTGATCTTTATGACCGGCGGTAGCGCGCGTTCACCGATTTTACGGGCTGGTGTTGAGCAAGCTCTGCCTAACGTGCC
TATCGTCAGTGGTAACTACTTTGGTTCGGTTACGGCGGGTCTGGCGCGCTGGGCACAGGTCTGTTTTCGCTGA

Upstream 100 bases:

>100_bases
GCCGTGAGTGAGTATCAAAAACAACAATTTCTTCTAGAGATAAGAGAAGGCTTGCGATAGGATCGCCGGCCTTTTTTCGC
TTAAGAGTAGGAGTGGGTAG

Downstream 100 bases:

>100_bases
TCATCTTAAGCCTTCTTCGGAAGGCTTTTTTGTGTGGCGAATTTATTGAAAGCAAGGGGTTTGGCTATCTGCGCAGAATT
GCGTAACATGGCGCATCTTT

Product: putative chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MFIGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPADALGEQLLRRSVASNREEGID
LQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLGAMGLHDIQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNF
HGRGGEDSNQQAENILRRAATRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSLIQMGPSWRGKADRTQ
SLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIAINDVSAQAKFFSRENLADLKRLHKEAREPE
KLARLLAVYHDTLGYSLVKKAEEAKIALSDTARAIAQIKVLSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTP
DVIFMTGGSARSPILRAGVEQALPNVPIVSGNYFGSVTAGLARWAQVCFR

Sequences:

>Translated_450_residues
MFIGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPADALGEQLLRRSVASNREEGID
LQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLGAMGLHDIQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNF
HGRGGEDSNQQAENILRRAATRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSLIQMGPSWRGKADRTQ
SLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIAINDVSAQAKFFSRENLADLKRLHKEAREPE
KLARLLAVYHDTLGYSLVKKAEEAKIALSDTARAIAQIKVLSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTP
DVIFMTGGSARSPILRAGVEQALPNVPIVSGNYFGSVTAGLARWAQVCFR
>Mature_450_residues
MFIGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPADALGEQLLRRSVASNREEGID
LQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLGAMGLHDIQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNF
HGRGGEDSNQQAENILRRAATRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSLIQMGPSWRGKADRTQ
SLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIAINDVSAQAKFFSRENLADLKRLHKEAREPE
KLARLLAVYHDTLGYSLVKKAEEAKIALSDTARAIAQIKVLSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTP
DVIFMTGGSARSPILRAGVEQALPNVPIVSGNYFGSVTAGLARWAQVCFR

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=450, Percent_Identity=55.1111111111111, Blast_Score=503, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 49097; Mature: 49097

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPAD
CEEEEECCCCCCEEEECCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCCCHH
ALGEQLLRRSVASNREEGIDLQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLGAMGLHD
HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHEEEEECCCCEEEEEECCHHHHHHCCCHH
IQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNFHGRGGEDSNQQAENILRRAA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
TRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSLIQMGPSWRGKADRTQ
HHHCCEEEEEEEEHHHCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHH
SLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIAINDVSAQAKF
HHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCHHHHHH
FSRENLADLKRLHKEAREPEKLARLLAVYHDTLGYSLVKKAEEAKIALSDTARAIAQIKV
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHH
LSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTPDVIFMTGGSARSPILRAGVE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
QALPNVPIVSGNYFGSVTAGLARWAQVCFR
HHCCCCCEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPAD
CEEEEECCCCCCEEEECCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCCCHH
ALGEQLLRRSVASNREEGIDLQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLGAMGLHD
HHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHEEEEECCCCEEEEEECCHHHHHHCCCHH
IQLSFFEDLVCAMMANIKAQAEAHSDAVIQDAVIGRPVNFHGRGGEDSNQQAENILRRAA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
TRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSLIQMGPSWRGKADRTQ
HHHCCEEEEEEEEHHHCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHH
SLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQFWNPIAINDVSAQAKF
HHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCCEEECCCHHHHHH
FSRENLADLKRLHKEAREPEKLARLLAVYHDTLGYSLVKKAEEAKIALSDTARAIAQIKV
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHH
LSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVTPDVIFMTGGSARSPILRAGVE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
QALPNVPIVSGNYFGSVTAGLARWAQVCFR
HHCCCCCEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]