| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081503
Identifier: 227081503
GI number: 227081503
Start: 1372572
End: 1374101
Strand: Reverse
Name: 227081503
Synonym: VCM66_1287
Alternate gene names: NA
Gene position: 1374101-1372572 (Counterclockwise)
Preceding gene: 227081504
Following gene: 227081502
Centisome position: 47.51
GC content: 51.9
Gene sequence:
>1530_bases ATGTTAGACGGAATTTTACAAGGGCTGGCAACGGCGGTAATGCCGACCAACCTGATGATGGTCATGATCGGCTGCTTTGT CGGCACCTTCATCGGCATGCTCCCGGGCTTAGGCCCCATTTCAGCGATTGCGCTGATGATCCCGATTACTTACGGATTAG AACCCGCTTCTGGCCTGATTTTGATGGCGGGCGTTTACTACGGCGCGATTTTTGGTGGCTCAACCTCATCGATTTTGATC AACGCACCGGGTTGTTCTTCAACTGTCGTGACCGCATTTGATGGCTACCCAATGGCGCAAAAAGGCCAAGCGGGTAAAGC TCTGGCATTGGCGGCTTACGCTTCCTTCACTGGCGGTACACTCTCAGCCATTATGTTGCTGTTTGCCGCGCCTGCCCTAG CCAAAGTATCACTCAGCTTCCAATCCTCCGACTATTTCGCGCTCATGCTGGTTGGCCTTTCCGCCGTGGCCGCCTTTGCC GGCAAAGGCCAAGTCATCAAGGCATGGATGATGACTGTACTCGGTTTAATGCTTTCCACCGTCGGTATTGATAAAGGCAT TGGTGTCGAACGCTTCACCTTCGGTCTGACCGATTTGATGGATGGCTTTAGCTTCCTACTCTTAGCCATGGCGACCTTTG CCCTTGGCGAAACCTTAATGGGCATTTTAAAACCAGATGCAGACAACAGTGCCAACGAGCAAGAGCAGATGAAAAACATC GGCAGCATGAAACTGACTAAGGAAGAAGTCAAAGAAGCGGCTCCGGTTTCACTGCGCTCCTCAATCCTTGGTTTCTTCAC TGGCGTACTGCCCGGTGCAGGCGCAACCATTGCGGCTTTCTTGGCTTATGGAATGGAACGTAACCTCGCCCCCAAAGCTA AAAAAGAAGAGTTCGGTCAAGGCTCGCTTCGTGGCTTAGTGGCGCCAGAATCGGCCAACAACGCGGCATCCAGCGGCTCA TTCGTACCACTATTAACGCTAGGTATTCCGGGTTCCGGCACCACAGCCATTATGTTGGGCGCATTGATCGCTTACGGCAT TCAACCGGGGCCACGTCTGTTTGTTGATCATCCCGATATTTTCTGGTCAGTCATCATTTCAATGTACGTGGGTAACATCG TACTGCTGATTCTCAACTTACCTTTGATCCCGTACATCTCCAAACTACTGGCAGTACCACGCACTGTACTGTTGCCGATG ATTCTGTTCTTCTCCATCACCGGCGTGTATTTGGTGTCGTTCAATACCATGGATGTGTATGTGATGATTCTGGTCGCGAT GGGCGCAATTGCCCTGCGTCTAGCGAACTTCCCACTCGCCCCCCTCCTGCTCGGCTTTATTTTGGGCGGTTTGATGGAAG AGAACTTACGCCGTGCATTGATCATTACGGATGGCGAAATCAGCTTCCTGTGGGAACGCCCAATCACTTTAGCCTTTACC GTATTGGCGATTGTGACACTCCTCAGCCCACTGTTTGGCCGCTTGATGGAACGTAAAAAGCGTCCAACTGGTGCGAAACT GCCGCACTGA
Upstream 100 bases:
>100_bases TTCATTCCCCTTCGTGCTCGCTTTTTATTTGTTACTGACCAAAGGACTGGATGTGTATCTAGAGCCGGGTCATCTGTTTA CTTTCGGATAGGAAATCATC
Downstream 100 bases:
>100_bases TTAAAGTCTATTCTTTGCAAGAAGATAAGCACGCCACCTTGCGGTGGCGTTTTTCTATATTTCGCGACGATCTGTTCACT ACTCTTGGAACAATCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLILMAGVYYGAIFGGSTSSILI NAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFA GKGQVIKAWMMTVLGLMLSTVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQGSLRGLVAPESANNAASSGS FVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPM ILFFSITGVYLVSFNTMDVYVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFT VLAIVTLLSPLFGRLMERKKRPTGAKLPH
Sequences:
>Translated_509_residues MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLILMAGVYYGAIFGGSTSSILI NAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFA GKGQVIKAWMMTVLGLMLSTVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQGSLRGLVAPESANNAASSGS FVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPM ILFFSITGVYLVSFNTMDVYVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFT VLAIVTLLSPLFGRLMERKKRPTGAKLPH >Mature_509_residues MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLILMAGVYYGAIFGGSTSSILI NAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGTLSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFA GKGQVIKAWMMTVLGLMLSTVGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQGSLRGLVAPESANNAASSGS FVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDIFWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPM ILFFSITGVYLVSFNTMDVYVMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFT VLAIVTLLSPLFGRLMERKKRPTGAKLPH
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 53580; Mature: 53580
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHH LMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGT HHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHH LSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLST HHHHHHHHHCHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQ CCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCC GSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDI CCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCHH FWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVY HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECHHHHH VMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHH VLAIVTLLSPLFGRLMERKKRPTGAKLPH HHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLDGILQGLATAVMPTNLMMVMIGCFVGTFIGMLPGLGPISAIALMIPITYGLEPASGLI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHH LMAGVYYGAIFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYASFTGGT HHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHH LSAIMLLFAAPALAKVSLSFQSSDYFALMLVGLSAVAAFAGKGQVIKAWMMTVLGLMLST HHHHHHHHHCHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VGIDKGIGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPDADNSANEQEQMKNI HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GSMKLTKEEVKEAAPVSLRSSILGFFTGVLPGAGATIAAFLAYGMERNLAPKAKKEEFGQ CCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCC GSLRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVDHPDI CCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCHH FWSVIISMYVGNIVLLILNLPLIPYISKLLAVPRTVLLPMILFFSITGVYLVSFNTMDVY HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECHHHHH VMILVAMGAIALRLANFPLAPLLLGFILGGLMEENLRRALIITDGEISFLWERPITLAFT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCHHHHHH VLAIVTLLSPLFGRLMERKKRPTGAKLPH HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]