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The map label for this gene is ompV [C]

Identifier: 227081489

GI number: 227081489

Start: 1358778

End: 1359551

Strand: Reverse

Name: ompV [C]

Synonym: VCM66_1273

Alternate gene names: 227081489

Gene position: 1359551-1358778 (Counterclockwise)

Preceding gene: 227081490

Following gene: 227081488

Centisome position: 47.0

GC content: 46.9

Gene sequence:

>774_bases
ATGAAAAAGATCGCACTATTTATCACAGCATCACTTATCGCAGGCAACGCTCTAGCTGCCCAAACTTACATTCGTAACGG
CAATATCTATACCCACGAAGGTCAATGGGCTGCGGAAGTGGGTGCTTTTGGCAGTACTGACCTACTCAAGGATCAAGACA
AATCTTACGGTGCTTTACTGAACTTTGGTTACCACGGTGAAGATTTCAACGCTGATCTTTCAGGCCTCAACTACCGCTTC
TTTGGCAACACAGGCGATATCGTGAATCTAGGCACTTATCTGACTGGCAGCGGCGTTGCTTATGACCAAGATTCAGCAAA
CAGTGTCAAAGGCATGGACAAGCGCAAAGCCACGGTTGACCTAGGTTTAAACGCCGATATCGCGCTGGGTGACGGTACGG
TATCAACCTACTTCCAACACGATATTCTTAATGAGAACAAAGGCTACAAAACGGGCGTTAACTACTTCCATATCATCGAT
TTGGGTGTCGCTGACTTAGTACCTTTTGCTGGTATCAGTTACCAGAGTTCGGATTACAACAACTACTATTTCGGTGTAAA
AGACAAAGAAGCAACCGCGCAGCGTAAAGCCTACCATGCGGGTGGCGACTTCTCTTACAACCTAGGTTACAAATTGGTTT
ACCCAATTAATGACCGTTGGGAAATCACCCAAACCAGTGCTTACACTCGTTTAGGCTCTGATATCGCTCATTCACCCATC
GTCGACAGCGCAAACCAGTGGCTCGTTGGTGCAACCGTCGCTTACCACTTCTAG

Upstream 100 bases:

>100_bases
CAAAAGTCAGACATAGCCATACAAACTATTGATATTGTCCTCGCTAGCGATTTTGTACAGTGTTCACATCCAAACATAAG
CTCTTAATTGGAAGGACATA

Downstream 100 bases:

>100_bases
TCGGCTAGCACTTCTGAACGATACCGCCTTCAGACAGGAGCTCCTCCTGTCTGATTTTTCTGCTTGAACTGCCCTGCGCT
ACCGAAATGGCTTTGATATG

Product: outer membrane protein OmpV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALLNFGYHGEDFNADLSGLNYRF
FGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVDLGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIID
LGVADLVPFAGISYQSSDYNNYYFGVKDKEATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPI
VDSANQWLVGATVAYHF

Sequences:

>Translated_257_residues
MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALLNFGYHGEDFNADLSGLNYRF
FGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVDLGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIID
LGVADLVPFAGISYQSSDYNNYYFGVKDKEATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPI
VDSANQWLVGATVAYHF
>Mature_257_residues
MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALLNFGYHGEDFNADLSGLNYRF
FGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVDLGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIID
LGVADLVPFAGISYQSSDYNNYYFGVKDKEATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPI
VDSANQWLVGATVAYHF

Specific function: May Serve As A Scaffold Protein Required For The Formation Of A Complex With Mrcb/Ponb And Mlta, This Complex Could Play A Role In Enlargement And Septation Of The Murein Sacculus. [C]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=258, Percent_Identity=23.6434108527132, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 28111; Mature: 28111

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALL
CCEEEEEEEEEHHHCCCCEEEEEEECCCEEEECCCCHHHHCCCCCCHHHCCCCCCCCEEE
NFGYHGEDFNADLSGLNYRFFGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVD
ECCCCCCCCCCCCCCCEEEEECCCCCEEEECEEEECCCEEECCCCCCCCCCCCCCCEEEE
LGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIIDLGVADLVPFAGISYQSSDYN
ECCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCC
NYYFGVKDKEATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPI
CEEEEECCCHHHHHHHHEECCCCEEEECCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCC
VDSANQWLVGATVAYHF
CCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MKKIALFITASLIAGNALAAQTYIRNGNIYTHEGQWAAEVGAFGSTDLLKDQDKSYGALL
CCEEEEEEEEEHHHCCCCEEEEEEECCCEEEECCCCHHHHCCCCCCHHHCCCCCCCCEEE
NFGYHGEDFNADLSGLNYRFFGNTGDIVNLGTYLTGSGVAYDQDSANSVKGMDKRKATVD
ECCCCCCCCCCCCCCCEEEEECCCCCEEEECEEEECCCEEECCCCCCCCCCCCCCCEEEE
LGLNADIALGDGTVSTYFQHDILNENKGYKTGVNYFHIIDLGVADLVPFAGISYQSSDYN
ECCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCC
NYYFGVKDKEATAQRKAYHAGGDFSYNLGYKLVYPINDRWEITQTSAYTRLGSDIAHSPI
CEEEEECCCHHHHHHHHEECCCCEEEECCEEEEEECCCCEEEEEHHHHHHHCCCCCCCCC
VDSANQWLVGATVAYHF
CCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA