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The map label for this gene is ydjC [C]

Identifier: 227081457

GI number: 227081457

Start: 1317797

End: 1318555

Strand: Direct

Name: ydjC [C]

Synonym: VCM66_1240

Alternate gene names: 227081457

Gene position: 1317797-1318555 (Clockwise)

Preceding gene: 227081456

Following gene: 227081458

Centisome position: 45.56

GC content: 44.93

Gene sequence:

>759_bases
ATGAAGGTAATTTTTAACGCGGACGATTTTGGTTTAACTCAAGGTGTCAACCAAGGTATTGTCAAGGCCCACCTTGATGG
GGTCGTAAAATCAACCACTTTGATGGTGGGCATGCCTGCAGAGCAGCATGCGGTTCAATTGGCAAAACAGCTTCCCGACT
TAAAAATTGGCCTTCATCTGAGGTTTACAGCAGGACGCCCTTTAACGGGAGAAAGAAACTTAACCGATGAACATGGTGTC
TTCACCGCTTATCGTGATTTTTGGCAGCGTAGAGACTATCAACCTGAGGCGATATACCATGAAGCTATCGCCCAGGTTGA
ACATTTTCTAAAGCTTGGACTCACTTTAAGTCATCTTGATAGCCATCATCACGCCCATACTCATCCTCAATTGGCTCCGA
TCATTTATGAAGTGGCTAAAAAATACCATGTTCCACTGCGGGATATTGGTATGGCAGGGGAGGAGGCGTTCGGCTGCCGT
TATCATTTCACTGATTTTTTCTATGATCAACGTTTGGGCATCGACCCTTTAATGAAACATCTGCTTGAGCTAAAAGAACG
CTTCGATCTGGTTGAGGTTATGTGCCATCCCGCGTTCGTGGATCCATTACTCGAAAAGTGCAGCGGTTATGCCAAGCAAA
GAGAAGAAGAGTTGCACATTCTAACTAGCGCACAATTAATACAATTGTTGGTAGCGCATGATATCGAAATCACGGATTAC
TCGGCTTTGATTTCTGCTCCTCTGCACTCCTGTGTATGA

Upstream 100 bases:

>100_bases
CGGGCGAAAGCCATTTTGGATGATATTCTGCGTGAAAATGCCGTTTATCTACCCCAATTTAAACTCACCACATGGTAACG
GTAATAAGGTGAATCTCTCG

Downstream 100 bases:

>100_bases
TGGGAGCTGTCTCGCCGAGTGGAGACTTCCGTAAGGGAGTGTCGTGCAAGCTCGCAGTTCCTTGTTTTTCTGAAGTTTCT
GACTTCCTATAGGCTCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKVIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQLPDLKIGLHLRFTAGRPLTGERNLTDEHGV
FTAYRDFWQRRDYQPEAIYHEAIAQVEHFLKLGLTLSHLDSHHHAHTHPQLAPIIYEVAKKYHVPLRDIGMAGEEAFGCR
YHFTDFFYDQRLGIDPLMKHLLELKERFDLVEVMCHPAFVDPLLEKCSGYAKQREEELHILTSAQLIQLLVAHDIEITDY
SALISAPLHSCV

Sequences:

>Translated_252_residues
MKVIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQLPDLKIGLHLRFTAGRPLTGERNLTDEHGV
FTAYRDFWQRRDYQPEAIYHEAIAQVEHFLKLGLTLSHLDSHHHAHTHPQLAPIIYEVAKKYHVPLRDIGMAGEEAFGCR
YHFTDFFYDQRLGIDPLMKHLLELKERFDLVEVMCHPAFVDPLLEKCSGYAKQREEELHILTSAQLIQLLVAHDIEITDY
SALISAPLHSCV
>Mature_252_residues
MKVIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQLPDLKIGLHLRFTAGRPLTGERNLTDEHGV
FTAYRDFWQRRDYQPEAIYHEAIAQVEHFLKLGLTLSHLDSHHHAHTHPQLAPIIYEVAKKYHVPLRDIGMAGEEAFGCR
YHFTDFFYDQRLGIDPLMKHLLELKERFDLVEVMCHPAFVDPLLEKCSGYAKQREEELHILTSAQLIQLLVAHDIEITDY
SALISAPLHSCV

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family

Homologues:

Organism=Homo sapiens, GI63054868, Length=207, Percent_Identity=29.4685990338164, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1788028, Length=232, Percent_Identity=40.5172413793103, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1240_VIBCM (C3LLY1)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002810008.1
- ProteinModelPortal:   C3LLY1
- SMR:   C3LLY1
- GeneID:   7772518
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_1240
- OMA:   AVRPFSD
- ProtClustDB:   PRK02134
- HAMAP:   MF_01246
- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948
- Gene3D:   G3DSA:3.20.20.370

Pfam domain/function: PF04794 YdjC

EC number: NA

Molecular weight: Translated: 28663; Mature: 28663

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQLPDLKIGLHL
CEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCEEEEEE
RFTAGRPLTGERNLTDEHGVFTAYRDFWQRRDYQPEAIYHEAIAQVEHFLKLGLTLSHLD
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
SHHHAHTHPQLAPIIYEVAKKYHVPLRDIGMAGEEAFGCRYHFTDFFYDQRLGIDPLMKH
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHCCCEEEHHHHHHHCCCCHHHHHHH
LLELKERFDLVEVMCHPAFVDPLLEKCSGYAKQREEELHILTSAQLIQLLVAHDIEITDY
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SALISAPLHSCV
HHHHHHHHHHCC
>Mature Secondary Structure
MKVIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQLPDLKIGLHL
CEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCEEEEEE
RFTAGRPLTGERNLTDEHGVFTAYRDFWQRRDYQPEAIYHEAIAQVEHFLKLGLTLSHLD
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
SHHHAHTHPQLAPIIYEVAKKYHVPLRDIGMAGEEAFGCRYHFTDFFYDQRLGIDPLMKH
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCHHCCCEEEHHHHHHHCCCCHHHHHHH
LLELKERFDLVEVMCHPAFVDPLLEKCSGYAKQREEELHILTSAQLIQLLVAHDIEITDY
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SALISAPLHSCV
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA