Click here to switch to the map view.

The map label for this gene is yfaE [H]

Identifier: 227081426

GI number: 227081426

Start: 1282316

End: 1282594

Strand: Reverse

Name: yfaE [H]

Synonym: VCM66_1209

Alternate gene names: 227081426

Gene position: 1282594-1282316 (Counterclockwise)

Preceding gene: 227081427

Following gene: 227081425

Centisome position: 44.34

GC content: 45.52

Gene sequence:

>279_bases
ATGGCTGCAATCAAAATCAACAAGCTGCTGACCATTGAATCTAACTCGAGCCATACTCTGCTTGAAAGTATGGAACAAGC
AGGGTTAGAGCCAGAATACAACTGTCGCGACGGGCACTGTGGTGCTTGTCGTTGTCAGCTCATCTCTGGTGAAGTCGAGT
ATGTTGGTTTTGCCATGGCTTATACACAAGGCAATGAAATTCTACCTTGTATCTGCCGTGCAAAAACGGCACTTGAGATA
GAACAAGTCACGTATCAGCTAAAAGCCAAACGCGCTTAA

Upstream 100 bases:

>100_bases
ACGTGCAAGTGGCACCTCAAGAGGCTGAGATCAGTTCTTACTTAGTGGGTCAAATCGACAACGAGGTAAGCGCCGATGAT
TTCGAGGGCTTTGAACTGTA

Downstream 100 bases:

>100_bases
CCCATCGCGCCCAACCAATGGTTTTCGACTTTATCAATAAGTCGATGAGGTCGATAACCGTTTGAGTTGAGAAAAGTGAG
GTGAACTCTACCCAAACTAT

Product: putative iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MAAIKINKLLTIESNSSHTLLESMEQAGLEPEYNCRDGHCGACRCQLISGEVEYVGFAMAYTQGNEILPCICRAKTALEI
EQVTYQLKAKRA

Sequences:

>Translated_92_residues
MAAIKINKLLTIESNSSHTLLESMEQAGLEPEYNCRDGHCGACRCQLISGEVEYVGFAMAYTQGNEILPCICRAKTALEI
EQVTYQLKAKRA
>Mature_91_residues
AAIKINKLLTIESNSSHTLLESMEQAGLEPEYNCRDGHCGACRCQLISGEVEYVGFAMAYTQGNEILPCICRAKTALEIE
QVTYQLKAKRA

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=78, Percent_Identity=38.4615384615385, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 10170; Mature: 10039

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIKINKLLTIESNSSHTLLESMEQAGLEPEYNCRDGHCGACRCQLISGEVEYVGFAMA
CCEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEE
YTQGNEILPCICRAKTALEIEQVTYQLKAKRA
EECCCCEEEEEECCCCHHHHHHHHEEEEECCC
>Mature Secondary Structure 
AAIKINKLLTIESNSSHTLLESMEQAGLEPEYNCRDGHCGACRCQLISGEVEYVGFAMA
CEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEE
YTQGNEILPCICRAKTALEIEQVTYQLKAKRA
EECCCCEEEEEECCCCHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]