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The map label for this gene is 227081425

Identifier: 227081425

GI number: 227081425

Start: 1281787

End: 1282215

Strand: Reverse

Name: 227081425

Synonym: VCM66_1208

Alternate gene names: NA

Gene position: 1282215-1281787 (Counterclockwise)

Preceding gene: 227081426

Following gene: 227081423

Centisome position: 44.33

GC content: 48.02

Gene sequence:

>429_bases
TTGGCGTTGCAGCTTCAAGTAGGAAGGGGAAAAGCCATTGAATATGAAGTTGCCGCCATGAATACGGCGGCTTCACAGGA
TATGCACAAACCAGAGCTTAGGCTCTGGCTCTATTCCCGCCACACAAAATCGCATCCGCAGTTCTCATGGATACCCACTT
ATTGCCGATTTCGCGTCCGCCATCATCAAATAGCGATAACCAATAGCCTTGGTTACTGGCGTTATCGAATTGGGTTGGAG
CGTGTAACCAGAGTGAAACTACATCCTCAGTTCCGTCGCTATGTGCTTCTCCTAAAACGACTTTTTGACTGGCGATTTTA
TACCAAACCAAGATTTTCGAGTGTTGAAACATGTCAGCCTCCTGCCGCCACTTTTCGGGGGAGCAGTCAGTGTACCGATC
CAACCAAGGGTTTAAAGCCTCTCTTTTGA

Upstream 100 bases:

>100_bases
CCCATCGCGCCCAACCAATGGTTTTCGACTTTATCAATAAGTCGATGAGGTCGATAACCGTTTGAGTTGAGAAAAGTGAG
GTGAACTCTACCCAAACTAT

Downstream 100 bases:

>100_bases
GACAAATCATGCTCTCTAAATAAATCATCCGCTTATTGATTAGACAAAATACGCATAACGAAAGCTAAACCATCAATAAG
CAGAATAAGTAGCGGATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MALQLQVGRGKAIEYEVAAMNTAASQDMHKPELRLWLYSRHTKSHPQFSWIPTYCRFRVRHHQIAITNSLGYWRYRIGLE
RVTRVKLHPQFRRYVLLLKRLFDWRFYTKPRFSSVETCQPPAATFRGSSQCTDPTKGLKPLF

Sequences:

>Translated_142_residues
MALQLQVGRGKAIEYEVAAMNTAASQDMHKPELRLWLYSRHTKSHPQFSWIPTYCRFRVRHHQIAITNSLGYWRYRIGLE
RVTRVKLHPQFRRYVLLLKRLFDWRFYTKPRFSSVETCQPPAATFRGSSQCTDPTKGLKPLF
>Mature_141_residues
ALQLQVGRGKAIEYEVAAMNTAASQDMHKPELRLWLYSRHTKSHPQFSWIPTYCRFRVRHHQIAITNSLGYWRYRIGLER
VTRVKLHPQFRRYVLLLKRLFDWRFYTKPRFSSVETCQPPAATFRGSSQCTDPTKGLKPLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16872; Mature: 16741

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQLQVGRGKAIEYEVAAMNTAASQDMHKPELRLWLYSRHTKSHPQFSWIPTYCRFRVR
CEEEEECCCCCEEEEEEEECCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEEEE
HHQIAITNSLGYWRYRIGLERVTRVKLHPQFRRYVLLLKRLFDWRFYTKPRFSSVETCQP
EEEEEEECCCCEEEEEECHHHHEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PAATFRGSSQCTDPTKGLKPLF
CCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALQLQVGRGKAIEYEVAAMNTAASQDMHKPELRLWLYSRHTKSHPQFSWIPTYCRFRVR
EEEEECCCCCEEEEEEEECCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEEEE
HHQIAITNSLGYWRYRIGLERVTRVKLHPQFRRYVLLLKRLFDWRFYTKPRFSSVETCQP
EEEEEEECCCCEEEEEECHHHHEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PAATFRGSSQCTDPTKGLKPLF
CCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA