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The map label for this gene is yegE [C]

Identifier: 227081388

GI number: 227081388

Start: 1251988

End: 1253106

Strand: Direct

Name: yegE [C]

Synonym: VCM66_1171

Alternate gene names: 227081388

Gene position: 1251988-1253106 (Clockwise)

Preceding gene: 227081387

Following gene: 227081390

Centisome position: 43.28

GC content: 47.45

Gene sequence:

>1119_bases
ATGCAATCATTCAAATGGGATCAATACTTCGAAACAGGATTGGAGGAGGTTGATGAGCAGCATCAATCTCTCGTCAATAT
CGTCAACCGCTACAGCTCTCTTTTGGCCGAAAATCATGTGTCACTAGATGAGATCCGTCTCGCTCTGTTTGAGCTTTCTC
GTTACTCTGAGTACCACTTCAAAGAAGAAGAGAAGCTCATGCGTGAGGTCGGCATTTCAGCACTTTATCTTGAAGAGCAC
ATTCAGGTTCATCGCACGTTTATGTCTGAAGTGTTTAGCATGCAAGCTTTCATCCATGATGTGGATGACCGCTCGGCCGT
TCAGTTATTGGAGTTTTTGATCCATTGGTTGGCGTACCACATCTTAGGTATCGATCAGAATATGGCGCGACAAGTGATTG
CGATTCGCTCAGGCATGAGTGCCGAAGAGGCCTACGCTAAAGAGGAACGAGAGAAAAATGCCGCGACGGAGCCATTACTC
AATGCCCTTAATGCGTTATTTGATCAAGTCTCTGAACGTAATCGAGAACTCGTCAAACTCAATCAATCACTGGAAGAAAA
AGTGATTGAGCGCACTCAGCAGCTTTACCAAGTCAATCGTCAGCTCGAAGCGCTATCCATGACCGACAGTTTGACGGGCT
TACCAAACCGCCGTAAAGCCATGCGTCAGCTTGTGTTGCATTGGAATCTTGCGCAAGACAACCAGCAGCCTTTCGTGTGT
GTCATGATCGATATTGATGGGTTTAAAGCGGTTAATGATCATCACGGGCACGATGTAGGCGACAAAGTGTTAACCACGAT
AGCGAACATGCTAAGAGATCACTTTCGTAGTGATGATCTGGTATGTCGCTTAGGTGGCGACGAGTTTCTAGTGATCTGTC
CTGAAACCAACACTGCTGGTGGTGTCTATATTGCAGAGCAGGTTTGCCGTGCGATTCAACAGCAGGTGATCTCGCTTGAA
AACAATATTCGTTGGCAAGGCAGTGTCAGTATGGGGGTTGCCGCGTTTGCCTCAAACATGAAAGATCACCATGAGCTGCT
GCGCGCGGCGGATCAAGCGGTTTACCTTGCCAAAAACAGCGGAAAAAATCGTGTTTGCGCTTTTGGTGCGCCGAGCTAG

Upstream 100 bases:

>100_bases
AAAGTCACGTCGAGTGATTCGCTTCTCGTTACAATTGCCCTAGATTTATTAAGGAATAATCGTGAGTTAGCGGTATAGGC
TAAAGAGTTGAGCGCCGAGC

Downstream 100 bases:

>100_bases
TTGAGTGATTTCAGCATCCACACGTCGCAGCCATTATGCTCTGTCCCCGCCATGGGCTGCGTTAAGTGCTCAAAACCAAG
CTGTTGGTAGAGCTTGATCG

Product: GGDEF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MQSFKWDQYFETGLEEVDEQHQSLVNIVNRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISALYLEEH
IQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLL
NALNALFDQVSERNRELVKLNQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVC
VMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLE
NNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCAFGAPS

Sequences:

>Translated_372_residues
MQSFKWDQYFETGLEEVDEQHQSLVNIVNRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISALYLEEH
IQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLL
NALNALFDQVSERNRELVKLNQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVC
VMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLE
NNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCAFGAPS
>Mature_372_residues
MQSFKWDQYFETGLEEVDEQHQSLVNIVNRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISALYLEEH
IQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLL
NALNALFDQVSERNRELVKLNQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVC
VMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLE
NNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCAFGAPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=186, Percent_Identity=32.7956989247312, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082007, Length=182, Percent_Identity=32.4175824175824, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693134, Length=223, Percent_Identity=30.9417040358744, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786584, Length=175, Percent_Identity=32, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787262, Length=158, Percent_Identity=34.1772151898734, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI87081881, Length=175, Percent_Identity=36, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87081977, Length=193, Percent_Identity=32.6424870466321, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787541, Length=169, Percent_Identity=35.5029585798817, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787802, Length=128, Percent_Identity=33.59375, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787816, Length=168, Percent_Identity=32.7380952380952, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788085, Length=200, Percent_Identity=27, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87081974, Length=172, Percent_Identity=27.906976744186, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1788956, Length=147, Percent_Identity=31.9727891156463, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 42611; Mature: 42611

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFKWDQYFETGLEEVDEQHQSLVNIVNRYSSLLAENHVSLDEIRLALFELSRYSEYHF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
KEEEKLMREVGISALYLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYH
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVKL
HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
VMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCC
GVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNS
CHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
GKNRVCAFGAPS
CCCCEEECCCCC
>Mature Secondary Structure
MQSFKWDQYFETGLEEVDEQHQSLVNIVNRYSSLLAENHVSLDEIRLALFELSRYSEYHF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
KEEEKLMREVGISALYLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYH
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVKL
HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
VMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCC
GVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNS
CHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
GKNRVCAFGAPS
CCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]