Click here to switch to the map view.

The map label for this gene is 227081373

Identifier: 227081373

GI number: 227081373

Start: 1232856

End: 1233581

Strand: Reverse

Name: 227081373

Synonym: VCM66_1156

Alternate gene names: NA

Gene position: 1233581-1232856 (Counterclockwise)

Preceding gene: 227081374

Following gene: 227081369

Centisome position: 42.65

GC content: 48.07

Gene sequence:

>726_bases
ATGTTCCTGACTGCATACCATTCAAATCAACAGCACCAATTTCAATTTACTCGCCAACAGGCTAGCCACTTTGCCAAATT
GGTCGCGGGTGATTTCAACCCCATCCATGACGAAGATAGTAAACGTTTCTGCGTACCGGGCGATCTGCTGTTTGCTGTAT
TGCTGCAAAAAGAAGGCATTAGCCAAAAGATGCGTTTTGATTTCTCTGGCATGGTGAGTGATGGCGTTGCTCTGCACATT
GAAAATAAGTGTCAGCGTGAAAGCGCAGTCGTGGATGCCAGCGGCAAAGAGTATCTGCACATGTCACGTGAAGGTGAAGT
CAACCGCAACCCTGCTTTTATTGAGCATGTGGTGACCAGCTATGTGCAGTTTTCTGGCATGAACTTCCCGCACATCATGG
TGCCGTTGATGGAAGAGCAGCAGATGATGATCAACTGCCAGCGTCCACTGGTGATTTATGAATCGATGGAAGTGGAATTT
ACCCGCCTTGATCTCCCCCATCCAGAAGTAGAGTTTGCGGGCGCGACCTTTGATGTGGATGGCAAACGCGGCTTAGTGAC
ACTCAACTTCGTGTTTAAAGATGAAGGACAAGTGGTCGGTAAAGGCCTAAAACGTATGGTTGCCAGCGGTTTAAAACCTT
ACGACCAAGCGGAAATCGATGATCTCGTCAACCGTTTCAATGAGCGCAAAGAAGCCTTCCTTAGCCAGATTGAGCAAGCG
GCATAA

Upstream 100 bases:

>100_bases
AAATCACTTGAAGTGGTAAAAGAACATCTCCACTGGATAGACCAATGATTGTAAGATTCTGTCCTATAATGCGCGCAGTT
TAGTTGAGATAGCGATAACC

Downstream 100 bases:

>100_bases
TTCGTAGAGCATCTAAATCTAATGCAAAAAAATAACCCGCGGATAGCGGGTTATTTTTTATCTCGGATAGGTAATCAAGC
GGTTTTCCGTCTCATCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVSDGVALHI
ENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTSYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF
TRLDLPHPEVEFAGATFDVDGKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA
A

Sequences:

>Translated_241_residues
MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVSDGVALHI
ENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTSYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF
TRLDLPHPEVEFAGATFDVDGKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA
A
>Mature_241_residues
MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVSDGVALHI
ENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTSYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF
TRLDLPHPEVEFAGATFDVDGKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27472; Mature: 27472

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGI
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC
SQKMRFDFSGMVSDGVALHIENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTS
CHHHHCCCCCCCCCCEEEEECCHHHHHHEEECCCCCCEEEECCCCCCCCCHHHHHHHHHH
YVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFTRLDLPHPEVEFAGATFDVD
HHHHCCCCCCEEEEEHHHCCHHHEECCCCEEEEECCEEEEEEECCCCCCEEECCCEEEEC
GKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA
CCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure
MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGI
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC
SQKMRFDFSGMVSDGVALHIENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTS
CHHHHCCCCCCCCCCEEEEECCHHHHHHEEECCCCCCEEEECCCCCCCCCHHHHHHHHHH
YVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFTRLDLPHPEVEFAGATFDVD
HHHHCCCCCCEEEEEHHHCCHHHEECCCCEEEEECCEEEEEEECCCCCCEEECCCEEEEC
GKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA
CCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA