| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081365
Identifier: 227081365
GI number: 227081365
Start: 1223837
End: 1224034
Strand: Reverse
Name: 227081365
Synonym: VCM66_1148
Alternate gene names: NA
Gene position: 1224034-1223837 (Counterclockwise)
Preceding gene: 227081366
Following gene: 227081363
Centisome position: 42.32
GC content: 40.91
Gene sequence:
>198_bases GTGGGAGAGAAGACAATGTTTAGCGTAGAAGGCATCTGTGATTGGTGTAAACAGCCAAAACTACTGACAAGACATGAATA TGTGGATGGTAAAGCACATCATTCTTGTGAAAACTGCAATGAGTTTGCCCGAATGGATGTAAGGCAATTTAATTTAGCCG AGATGGCATTCCGAGAAAAACAACAAGCAGCTCGATAA
Upstream 100 bases:
>100_bases GCCTATGCGCAATCGATCTCCTTCTCATCCATAATTACAAATAGTTAACTTTTTTTATTTAGACGTGCCATAATCCGCGC GAAATTTACGCCTGATTTAG
Downstream 100 bases:
>100_bases ACTGCATCCCCTTCAACTTGAAAAAGCGCCTTCTGGCGCTTTTTCTGTTTTCTCCGCACATACCTGTATAAGCCGCCGCA CGGCTTCCGTGGCATTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MGEKTMFSVEGICDWCKQPKLLTRHEYVDGKAHHSCENCNEFARMDVRQFNLAEMAFREKQQAAR
Sequences:
>Translated_65_residues MGEKTMFSVEGICDWCKQPKLLTRHEYVDGKAHHSCENCNEFARMDVRQFNLAEMAFREKQQAAR >Mature_64_residues GEKTMFSVEGICDWCKQPKLLTRHEYVDGKAHHSCENCNEFARMDVRQFNLAEMAFREKQQAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7652; Mature: 7521
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 12.3 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEKTMFSVEGICDWCKQPKLLTRHEYVDGKAHHSCENCNEFARMDVRQFNLAEMAFREK CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QQAAR HHCCC >Mature Secondary Structure GEKTMFSVEGICDWCKQPKLLTRHEYVDGKAHHSCENCNEFARMDVRQFNLAEMAFREK CCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QQAAR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA