Click here to switch to the map view.

The map label for this gene is 227081347

Identifier: 227081347

GI number: 227081347

Start: 1206347

End: 1206439

Strand: Reverse

Name: 227081347

Synonym: VCM66_1130

Alternate gene names: NA

Gene position: 1206439-1206347 (Counterclockwise)

Preceding gene: 227081348

Following gene: 227081346

Centisome position: 41.71

GC content: 43.01

Gene sequence:

>93_bases
TTGAGCGGGCTTTTTATTGGTTTTTTCCACCTATCACTGCTGTTTCGCTACTTTCTCAACGCGGTGATCAGTGCACAATC
GAATCATGGTTAA

Upstream 100 bases:

>100_bases
CCAGCGGATGCTGAACTGGCTTGGTGGCGCACTTGGACAAGTTCTTGGTGGGCTCACGTGTATTTCTAAGTTTAGATACT
CACACACCTAGCCCGCCAAC

Downstream 100 bases:

>100_bases
GGAGGTCTTATGAATAAGGCCATCAACATAAAGAAAACCGCGCCGCTTGAGGTGCTACACAGTGAATTGCCTTATACGCA
AGATCCTACGGCTTTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 29

Protein sequence:

>30_residues
MSGLFIGFFHLSLLFRYFLNAVISAQSNHG

Sequences:

>Translated_30_residues
MSGLFIGFFHLSLLFRYFLNAVISAQSNHG
>Mature_29_residues
SGLFIGFFHLSLLFRYFLNAVISAQSNHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3388; Mature: 3257

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLFIGFFHLSLLFRYFLNAVISAQSNHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGLFIGFFHLSLLFRYFLNAVISAQSNHG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA