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The map label for this gene is 227081275

Identifier: 227081275

GI number: 227081275

Start: 1129198

End: 1130181

Strand: Direct

Name: 227081275

Synonym: VCM66_1058

Alternate gene names: NA

Gene position: 1129198-1130181 (Clockwise)

Preceding gene: 227081274

Following gene: 227081276

Centisome position: 39.04

GC content: 50.3

Gene sequence:

>984_bases
TTGGGGTATTTCAACTTCTGTAAGCAGAAAGGAGTATGTATGTCTGCTTTTGCCTTTTTTGGCGCTTTGGAGCTTGGCTT
GTTGTATGGCTTAGTAGCTTTGGGCGTGTATTTAACTTTCCGAGTGCTGGATTTCCCTGATTTGAGCGTCGACGGCAGTT
TCCCAATGGGCGCTGCGGTGGCGGCTACTGCGATTGTGGCAGGAATTAATCCATGGGTGGCGACAGGATTGGCCATTCTT
GCTGGCGCCGCTACCGGTTGGGTCACGGCTTTTCTGAGTGTGCGATGTGGTATCTTGCATCTCTTGGCCTCGATTTTGAC
CATGATTGCTGCGTTTTCCATCAACATCCGCATTATGGGACGTCCTAATCTGGCCTTATTGGGTGAAGACACCATTTTGA
CCCCGTTTGAAGCCTTGGGTGATCCTGTCTTAATTCGTCCTCTCGTTGTCGCAGTATTGGTCGTGATTTCTGCGCTATTA
GTTATTCGACTGCTCAACAGCGATTTCGGTTTAGGATTGCGAGCCACAGGTGTCAACGCTCGTATGGTGGCAGCCCAAGG
GGCAAGCACCGCGTTTTACACGTATTTCTGTTTGGCTCTGTCTAATGGTTTTGTCGGTTTTGCAGGGGCTCTATTTGCGC
AAACCAACAGTTTTGCGGATGTCACTTCTGGCGTTGGTACAATTGTGGTGGGGCTTGCTGCGGTTATTTTAGGACAAACC
CTGATCCCCGGTCGCAAGATCTGGGTCGCTGTCGTGGCGGTCATTGTCGGCTCTGTGCTGTACCGTTTAGCGGTTGCCTT
CGCACTCAGTTCAGGCATGTTTGGCTTACAAGCGTCCGATCTTAACTTGGTGACTGCCGTGTTAGTGGCTTTGGCGCTGA
TCATGCCGAAGATTAAAAGGAATTTAAAATCAAAAAAGCGTAACGCACCTGCTCAGAAGCCCGAAGTCTCTCAGCAGGGA
AGCGTGTCAGGAGATGCAGTATGA

Upstream 100 bases:

>100_bases
TGCGCGTGCAACCAGTACCAAATAAGTAAGCTCTATCCAAATGACGAGGGGGTAACGCTTGACGCGCTAGCCCCTCGTCG
GAAGCGTATATTCCAAGGAG

Downstream 100 bases:

>100_bases
TCCGTTTGCAAGATATTCAGGTGACGTTTAACCCTGGCACGATTCTGGAAAATCGCGCATTACGCGGCGTATCGCTAGAG
GTTCCGGAACACCAATTTTT

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MGYFNFCKQKGVCMSAFAFFGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAVAATAIVAGINPWVATGLAIL
AGAATGWVTAFLSVRCGILHLLASILTMIAAFSINIRIMGRPNLALLGEDTILTPFEALGDPVLIRPLVVAVLVVISALL
VIRLLNSDFGLGLRATGVNARMVAAQGASTAFYTYFCLALSNGFVGFAGALFAQTNSFADVTSGVGTIVVGLAAVILGQT
LIPGRKIWVAVVAVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALALIMPKIKRNLKSKKRNAPAQKPEVSQQG
SVSGDAV

Sequences:

>Translated_327_residues
MGYFNFCKQKGVCMSAFAFFGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAVAATAIVAGINPWVATGLAIL
AGAATGWVTAFLSVRCGILHLLASILTMIAAFSINIRIMGRPNLALLGEDTILTPFEALGDPVLIRPLVVAVLVVISALL
VIRLLNSDFGLGLRATGVNARMVAAQGASTAFYTYFCLALSNGFVGFAGALFAQTNSFADVTSGVGTIVVGLAAVILGQT
LIPGRKIWVAVVAVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALALIMPKIKRNLKSKKRNAPAQKPEVSQQG
SVSGDAV
>Mature_326_residues
GYFNFCKQKGVCMSAFAFFGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAVAATAIVAGINPWVATGLAILA
GAATGWVTAFLSVRCGILHLLASILTMIAAFSINIRIMGRPNLALLGEDTILTPFEALGDPVLIRPLVVAVLVVISALLV
IRLLNSDFGLGLRATGVNARMVAAQGASTAFYTYFCLALSNGFVGFAGALFAQTNSFADVTSGVGTIVVGLAAVILGQTL
IPGRKIWVAVVAVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALALIMPKIKRNLKSKKRNAPAQKPEVSQQGS
VSGDAV

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33917; Mature: 33786

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYFNFCKQKGVCMSAFAFFGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAV
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AATAIVAGINPWVATGLAILAGAATGWVTAFLSVRCGILHLLASILTMIAAFSINIRIMG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
RPNLALLGEDTILTPFEALGDPVLIRPLVVAVLVVISALLVIRLLNSDFGLGLRATGVNA
CCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCE
RMVAAQGASTAFYTYFCLALSNGFVGFAGALFAQTNSFADVTSGVGTIVVGLAAVILGQT
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
LIPGRKIWVAVVAVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALALIMPKIKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NLKSKKRNAPAQKPEVSQQGSVSGDAV
HHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYFNFCKQKGVCMSAFAFFGALELGLLYGLVALGVYLTFRVLDFPDLSVDGSFPMGAAV
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AATAIVAGINPWVATGLAILAGAATGWVTAFLSVRCGILHLLASILTMIAAFSINIRIMG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
RPNLALLGEDTILTPFEALGDPVLIRPLVVAVLVVISALLVIRLLNSDFGLGLRATGVNA
CCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCE
RMVAAQGASTAFYTYFCLALSNGFVGFAGALFAQTNSFADVTSGVGTIVVGLAAVILGQT
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
LIPGRKIWVAVVAVIVGSVLYRLAVAFALSSGMFGLQASDLNLVTAVLVALALIMPKIKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NLKSKKRNAPAQKPEVSQQGSVSGDAV
HHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]