Click here to switch to the map view.

The map label for this gene is ybaB [C]

Identifier: 227081228

GI number: 227081228

Start: 1082242

End: 1082604

Strand: Direct

Name: ybaB [C]

Synonym: VCM66_1010

Alternate gene names: 227081228

Gene position: 1082242-1082604 (Clockwise)

Preceding gene: 227081227

Following gene: 227081229

Centisome position: 37.42

GC content: 48.76

Gene sequence:

>363_bases
GTGAAACATTCAACGATAACCAGAGAGATAAAGATGTTTGGTAAAGGCGGAATGGGCAACCTGATGAAGCAAGCCCAACA
AATGCAAGAGCGTATGCAAAAGCTGCAAGAAGAGATCGCAAACATGGAAGTGACCGGTGAGTCCGGTGCTGGCCTTGTGA
AAGTGACCGTCACGGGCAGCCACAGCGTGCGCCGTGTCAACATCGATGAAAGTCTGATGGAAGACGACAAAGAGATGCTG
GAAGATTTGATTGCTGCCGCATTCAATGATGCCGCTCGTCGTATCGAAGAGACGCAAAAAGAAAAAATGGCTTCAATCAC
CGGTGGAATGCAACTGCCTCCGGGCATGAAAATGCCATTCTAA

Upstream 100 bases:

>100_bases
GTGCAGTTTATTGAGCGTCGATTTAATGCACAGCTCGATAGCGACAGCGTACGACCCATTTAACTGGGGTTGAAACCTAA
GTGTCTCACCCCCACACTAT

Downstream 100 bases:

>100_bases
TCTGAGCTGAATTTATGCGTACCAGTCACATGCTGGAACATTTGATGGAAGCATTACGCTGCCTGCCGGGCGTTGGCCCA
AAATCAGCGCAGCGTATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKHSTITREIKMFGKGGMGNLMKQAQQMQERMQKLQEEIANMEVTGESGAGLVKVTVTGSHSVRRVNIDESLMEDDKEML
EDLIAAAFNDAARRIEETQKEKMASITGGMQLPPGMKMPF

Sequences:

>Translated_120_residues
MKHSTITREIKMFGKGGMGNLMKQAQQMQERMQKLQEEIANMEVTGESGAGLVKVTVTGSHSVRRVNIDESLMEDDKEML
EDLIAAAFNDAARRIEETQKEKMASITGGMQLPPGMKMPF
>Mature_120_residues
MKHSTITREIKMFGKGGMGNLMKQAQQMQERMQKLQEEIANMEVTGESGAGLVKVTVTGSHSVRRVNIDESLMEDDKEML
EDLIAAAFNDAARRIEETQKEKMASITGGMQLPPGMKMPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=109, Percent_Identity=83.4862385321101, Blast_Score=194, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 13362; Mature: 13362

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.8 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.8 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSTITREIKMFGKGGMGNLMKQAQQMQERMQKLQEEIANMEVTGESGAGLVKVTVTGS
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCEEEEEEECC
HSVRRVNIDESLMEDDKEMLEDLIAAAFNDAARRIEETQKEKMASITGGMQLPPGMKMPF
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKHSTITREIKMFGKGGMGNLMKQAQQMQERMQKLQEEIANMEVTGESGAGLVKVTVTGS
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCEEEEEEECC
HSVRRVNIDESLMEDDKEMLEDLIAAAFNDAARRIEETQKEKMASITGGMQLPPGMKMPF
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]