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The map label for this gene is dedD [H]

Identifier: 227081176

GI number: 227081176

Start: 1030605

End: 1031201

Strand: Direct

Name: dedD [H]

Synonym: VCM66_0958

Alternate gene names: 227081176

Gene position: 1030605-1031201 (Clockwise)

Preceding gene: 227081175

Following gene: 227081177

Centisome position: 35.63

GC content: 47.07

Gene sequence:

>597_bases
ATGGCCAGTAAATTTCAAAGCCGTTTAGTTGGCACCATAGTGTTGGTCGCCATCGGCGTGATTGTGCTGCCCGATGTGCT
TGATGGTAAGAAAACGCATTTTAAAGAAGAGATTGCCAGCGTCCCAATTAAACCGCAGCCGGAAGGCGAGGTAGAAAAGT
TTGAAGTGCTGGATCCGGTGCAAGATGACATTGCCTTACCTGAAGCGCCGGTTTCCGTCACTCAGACCGGTCAGGATAAT
CAAGCCAGTGTTGCACCAGTAACGCCGACGGTGGTGAAAAACAGTACGCCAGTCAAAGTGGCAGCAGAGCAGCCTGTGCC
CGTGACGGTCACAGAGGTTCCAGAAACGAATGAATACCAAGATTCCGCGTGGATCATTCAGTTAGTGGCACTGAAAAATG
CCGATAATGCACGCAATCTCGTGGCTGACTTACAAAAGCGTGGTTACCAAGCGCATGTCAAACAAGAGAATGATTTCACC
CGAGTGATTATTGGTCCTGATGTTTCAAAATCTAAGTTAGAAACCCAACTCGTGGAATTAGAAAAAATTACCGGTGCTAA
AGGTCAATTGCTCAAATTCAAACCACTAAACCCATAA

Upstream 100 bases:

>100_bases
CGCGTTGACACAGGCTGGGGCACAAGATGTCATTGTAGTTGCGGGCTCTTTCCATACGGTAGGTGAAGTGCTTGAACATT
GGCAAAAGAGAGGGGAATAA

Downstream 100 bases:

>100_bases
GAAAACGTTTGCGTCGCGTTTTTTTCTGTTAAAATGCGCGCCAACTTAAGATGTAAGAACTCATGAACTGGTTAGATATT
GTCATTTTAAGTGTGATCGG

Product: dedD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MASKFQSRLVGTIVLVAIGVIVLPDVLDGKKTHFKEEIASVPIKPQPEGEVEKFEVLDPVQDDIALPEAPVSVTQTGQDN
QASVAPVTPTVVKNSTPVKVAAEQPVPVTVTEVPETNEYQDSAWIIQLVALKNADNARNLVADLQKRGYQAHVKQENDFT
RVIIGPDVSKSKLETQLVELEKITGAKGQLLKFKPLNP

Sequences:

>Translated_198_residues
MASKFQSRLVGTIVLVAIGVIVLPDVLDGKKTHFKEEIASVPIKPQPEGEVEKFEVLDPVQDDIALPEAPVSVTQTGQDN
QASVAPVTPTVVKNSTPVKVAAEQPVPVTVTEVPETNEYQDSAWIIQLVALKNADNARNLVADLQKRGYQAHVKQENDFT
RVIIGPDVSKSKLETQLVELEKITGAKGQLLKFKPLNP
>Mature_197_residues
ASKFQSRLVGTIVLVAIGVIVLPDVLDGKKTHFKEEIASVPIKPQPEGEVEKFEVLDPVQDDIALPEAPVSVTQTGQDNQ
ASVAPVTPTVVKNSTPVKVAAEQPVPVTVTEVPETNEYQDSAWIIQLVALKNADNARNLVADLQKRGYQAHVKQENDFTR
VIIGPDVSKSKLETQLVELEKITGAKGQLLKFKPLNP

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=222, Percent_Identity=31.981981981982, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 21519; Mature: 21388

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKFQSRLVGTIVLVAIGVIVLPDVLDGKKTHFKEEIASVPIKPQPEGEVEKFEVLDPV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
QDDIALPEAPVSVTQTGQDNQASVAPVTPTVVKNSTPVKVAAEQPVPVTVTEVPETNEYQ
CHHCCCCCCCCEEEECCCCCCCEECCCCHHEECCCCCEEEEECCCCCEEEECCCCCCCCC
DSAWIIQLVALKNADNARNLVADLQKRGYQAHVKQENDFTRVIIGPDVSKSKLETQLVEL
CCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHH
EKITGAKGQLLKFKPLNP
HHHCCCCCCEEEEECCCC
>Mature Secondary Structure 
ASKFQSRLVGTIVLVAIGVIVLPDVLDGKKTHFKEEIASVPIKPQPEGEVEKFEVLDPV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
QDDIALPEAPVSVTQTGQDNQASVAPVTPTVVKNSTPVKVAAEQPVPVTVTEVPETNEYQ
CHHCCCCCCCCEEEECCCCCCCEECCCCHHEECCCCCEEEEECCCCCEEEECCCCCCCCC
DSAWIIQLVALKNADNARNLVADLQKRGYQAHVKQENDFTRVIIGPDVSKSKLETQLVEL
CCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHH
EKITGAKGQLLKFKPLNP
HHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]