| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is hemH [H]
Identifier: 227081161
GI number: 227081161
Start: 1008688
End: 1009662
Strand: Direct
Name: hemH [H]
Synonym: VCM66_0943
Alternate gene names: 227081161
Gene position: 1008688-1009662 (Clockwise)
Preceding gene: 227081160
Following gene: 227081163
Centisome position: 34.87
GC content: 47.28
Gene sequence:
>975_bases TTGAAGGAAGCCATGAATAATCATAAAAAACTTGGCATTTTGCTTGCCAACTTAGGTACTCCGCAAGCGCCAACCTCTCA AGCGGTAAAAGCGTTTTTGAGCCAATTTCTGCATGATCAGCGAGTGGTAGACATGAGTCGTTGGTTATGGTGCCCCCTTT TACATGGCATTATCTTGCCAACGCGATCGCCTAAGGTGGCTAAGCTGTATCAATCAATCTGGATGGATGAGGGATCGCCT TTGATGGTCTACTCTCGACGTCAACGCGATAAATTGGCAGAGCTTAGCCAACGGCCTGTTGAGCTAGGGATGACCTACGG AGAGCCGAGTTTATTGGAGGGTGTACGCAAGTTGCAGCAACAAGGTGTTGAACAGATAGTGGTGCTGCCGCTTTATCCGC AATATTCCGCGACGACAACGGCGGCGGTGTTTGATGGTCTCGCCAAAGCGTTGCGTCAGTTACCTGTAGTCCCTGAATTG CACTTTATTCGTGATTATCATGACCATCCACTCTATATCCAAGCCCTCGCGAAAAGCGTTCGTGCTTCATGGCAACAACA TGGACAAGGTGATCTGTTACTCTGCTCTTACCATGGTATTCCCAAACGTTATGCGCAAAATGGCGATATCTACCCAGAGC ATTGCCTAAAAACCACAGAGTTATTGGCTCAAGCATTAGGATTGCCTCAAGATAAAGTCATGATGACTTACCAATCTCAG TTTGGTAAGGAAGAGTGGCTGCAGCCATACACGGACAAGACGATGGAAGCGCTTCCTCGCCAAGGCATTAAAAAGCTTGA TGTTATTTGCCCTGCCTTTTCAGTGGACTGCTTAGAAACGCTGGAAGAAATTGCTGAGCAGAACCAAGAAATCTTTTTGC ACAGTGGTGGCGAAGCGTTCCACTATGTTCCCTGTTTGAATGACAGTCAGAGCCATATTGAGCTGATGGCCGCGCTGGTT AAAGTCGATTGTTAA
Upstream 100 bases:
>100_bases TGCTGATTGCATTGATAGGTGAAATAAAGCGGCAGTAAAGCCGCTTTTTTTATAAACTTTTTACCAGAAAGAGACGTAAT AACGTATTCAACAGTGCATT
Downstream 100 bases:
>100_bases GCTCCAATGTGAGCGAGTCATCCATAAAGCAGCCATACAAAAACAGCGCCTCATTCGGCGCTGTTTTCAGTTTCACGGGG CGTATTTATGATTCAATCTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILPTRSPKVAKLYQSIWMDEGSP LMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQQGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPEL HFIRDYHDHPLYIQALAKSVRASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAFHYVPCLNDSQSHIELMAALV KVDC
Sequences:
>Translated_324_residues MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILPTRSPKVAKLYQSIWMDEGSP LMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQQGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPEL HFIRDYHDHPLYIQALAKSVRASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAFHYVPCLNDSQSHIELMAALV KVDC >Mature_324_residues MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILPTRSPKVAKLYQSIWMDEGSP LMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQQGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPEL HFIRDYHDHPLYIQALAKSVRASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAFHYVPCLNDSQSHIELMAALV KVDC
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=326, Percent_Identity=23.9263803680982, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI60499021, Length=326, Percent_Identity=23.9263803680982, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1786681, Length=312, Percent_Identity=59.6153846153846, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6324750, Length=340, Percent_Identity=26.4705882352941, Blast_Score=86, Evalue=6e-18, Organism=Drosophila melanogaster, GI17864156, Length=329, Percent_Identity=25.531914893617, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24651774, Length=264, Percent_Identity=25.3787878787879, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 36708; Mature: 36708
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILP CCCCHHCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRSPKVAKLYQSIWMDEGSPLMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQ CCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH QGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPELHFIRDYHDHPLYIQALAKSV CCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHH RASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ HHHHHHCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAF CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEE HYVPCLNDSQSHIELMAALVKVDC EEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILP CCCCHHCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRSPKVAKLYQSIWMDEGSPLMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQ CCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH QGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPELHFIRDYHDHPLYIQALAKSV CCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHH RASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ HHHHHHCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAF CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEE HYVPCLNDSQSHIELMAALVKVDC EEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]