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The map label for this gene is qmcA [H]

Identifier: 227081150

GI number: 227081150

Start: 998248

End: 999168

Strand: Reverse

Name: qmcA [H]

Synonym: VCM66_0932

Alternate gene names: 227081150

Gene position: 999168-998248 (Counterclockwise)

Preceding gene: 227081151

Following gene: 227081149

Centisome position: 34.54

GC content: 45.49

Gene sequence:

>921_bases
ATGGCTATTGATTCATTGATCACTATCGCAGTTCTCGTACTGGCTGTGGTTATTTTCATCTCCTCTGCAGTAAAAACCGT
GCCTCAAGGTAATAACTGGACGGTCGAAAGATTTGGGCGCTACACACAAACACTCAAGCCCGGACTCAACCTAATCATCC
CTTTTATTGACCGTGTTGGTCATAAAATCAATATGATGGAACAAGTTTTAGATATCCCAGCTCAGGAAGTCATTTCCAAA
GACAACGCGAATGTTGTGATTGATGCGGTCTGTTTTGTACAAGTCATTGATGCAGCGAAAGCCGCTTATGAGGTTAGCCA
ACTGCAACATGCTATCCGTAACCTCACCCTCACCAATATGCGTACCGTATTAGGTTCAATGGAGCTGGATGAGATGCTCA
GTCAACGTGACATGATTAATACCAAGCTGCTGTCAATTGTTGACCATGCCACCAGCCCGTGGGGTGTAAAAGTGACTCGT
ATTGAAATTAAAGATGTACAGCCACCTGCTGATTTGACCGCTGCAATGAATGCTCAGATGAAAGCTGAACGTAACAAACG
GGCGGAAGTCCTTGAAGCAGAAGGGGTACGCCAAGCGCAAATCTTACGTGCGGAAGGTCAAAAACAATCCGAAATATTGA
AAGCTGAAGGGGAAAAACAAGCCGCCATTTTACAAGCTGAAGCACGTGAGCGTGCCGCCGAAGCGGAAGCCAAGGCAACC
ACTATGGTTTCAGAAGCCATCGCTAAAGGTGATATGCAAGCGGTCAATTACTTTATTGCTCAAGGCTATACCGAAGCGCT
GAAAGCTATTGGTCAAGCAGAGAATGGTAAGATCATCATGCTGCCACTTGAAGCAACAGGCCTCATGGGTTCTGTCGCTG
GAATTGCAGAAATGTTTAAATCATCACAAACCACTAAGTAG

Upstream 100 bases:

>100_bases
TTTTTTTAGGCAAGAGGCGCTCATTCTTAGCTGACTAAATATTCGCTCATCGCTTTAACGGCAAGTAGCAAGCTATTACT
TTAAAAAACAAGGATACGTC

Downstream 100 bases:

>100_bases
GTGCCCCGTGGTAGAGCTACTCTCACAATTGAATTTCTGGCATTGGTTGGCCTTGGGCCTACTTCTATTAGCCGCTGAGC
TACTCGGCACTGCAGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAIDSLITIAVLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVGHKINMMEQVLDIPAQEVISK
DNANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNMRTVLGSMELDEMLSQRDMINTKLLSIVDHATSPWGVKVTR
IEIKDVQPPADLTAAMNAQMKAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEAEAKAT
TMVSEAIAKGDMQAVNYFIAQGYTEALKAIGQAENGKIIMLPLEATGLMGSVAGIAEMFKSSQTTK

Sequences:

>Translated_306_residues
MAIDSLITIAVLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVGHKINMMEQVLDIPAQEVISK
DNANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNMRTVLGSMELDEMLSQRDMINTKLLSIVDHATSPWGVKVTR
IEIKDVQPPADLTAAMNAQMKAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEAEAKAT
TMVSEAIAKGDMQAVNYFIAQGYTEALKAIGQAENGKIIMLPLEATGLMGSVAGIAEMFKSSQTTK
>Mature_305_residues
AIDSLITIAVLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVGHKINMMEQVLDIPAQEVISKD
NANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNMRTVLGSMELDEMLSQRDMINTKLLSIVDHATSPWGVKVTRI
EIKDVQPPADLTAAMNAQMKAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEAEAKATT
MVSEAIAKGDMQAVNYFIAQGYTEALKAIGQAENGKIIMLPLEATGLMGSVAGIAEMFKSSQTTK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=211, Percent_Identity=39.3364928909953, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI38016911, Length=185, Percent_Identity=36.7567567567568, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI221316744, Length=191, Percent_Identity=32.4607329842932, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI21686995, Length=191, Percent_Identity=32.4607329842932, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI7657615, Length=188, Percent_Identity=29.2553191489362, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI20149563, Length=179, Percent_Identity=28.4916201117318, Blast_Score=68, Evalue=9e-12,
Organism=Escherichia coli, GI1786697, Length=297, Percent_Identity=72.3905723905724, Blast_Score=467, Evalue=1e-133,
Organism=Escherichia coli, GI1790616, Length=211, Percent_Identity=26.5402843601896, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI32564147, Length=288, Percent_Identity=35.0694444444444, Blast_Score=179, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17569493, Length=185, Percent_Identity=34.5945945945946, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI193209764, Length=185, Percent_Identity=34.5945945945946, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17569497, Length=189, Percent_Identity=32.2751322751323, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17570459, Length=200, Percent_Identity=34.5, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569499, Length=195, Percent_Identity=34.8717948717949, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71987612, Length=198, Percent_Identity=34.3434343434343, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25153583, Length=198, Percent_Identity=34.3434343434343, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987621, Length=198, Percent_Identity=34.3434343434343, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71989948, Length=156, Percent_Identity=35.8974358974359, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71989955, Length=156, Percent_Identity=35.8974358974359, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI32566490, Length=153, Percent_Identity=35.9477124183007, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193210507, Length=192, Percent_Identity=34.8958333333333, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17570161, Length=192, Percent_Identity=34.8958333333333, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=119, Percent_Identity=33.6134453781513, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17542664, Length=164, Percent_Identity=28.0487804878049, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45550506, Length=296, Percent_Identity=36.1486486486487, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI45556022, Length=212, Percent_Identity=35.8490566037736, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI62484448, Length=196, Percent_Identity=33.6734693877551, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI281365664, Length=196, Percent_Identity=33.6734693877551, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI62484274, Length=196, Percent_Identity=33.6734693877551, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24657857, Length=196, Percent_Identity=33.6734693877551, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI18860517, Length=196, Percent_Identity=31.6326530612245, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281361631, Length=190, Percent_Identity=25.2631578947368, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281361633, Length=190, Percent_Identity=25.2631578947368, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356845, Length=186, Percent_Identity=26.3440860215054, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI28573263, Length=196, Percent_Identity=25, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281361635, Length=131, Percent_Identity=25.1908396946565, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33332; Mature: 33201

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDSLITIAVLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
HKINMMEQVLDIPAQEVISKDNANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNM
HHHHHHHHHHCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVLGSMELDEMLSQRDMINTKLLSIVDHATSPWGVKVTRIEIKDVQPPADLTAAMNAQM
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHH
KAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEAEAKAT
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TMVSEAIAKGDMQAVNYFIAQGYTEALKAIGQAENGKIIMLPLEATGLMGSVAGIAEMFK
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
SSQTTK
CCCCCC
>Mature Secondary Structure 
AIDSLITIAVLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
HKINMMEQVLDIPAQEVISKDNANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNM
HHHHHHHHHHCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTVLGSMELDEMLSQRDMINTKLLSIVDHATSPWGVKVTRIEIKDVQPPADLTAAMNAQM
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHH
KAERNKRAEVLEAEGVRQAQILRAEGQKQSEILKAEGEKQAAILQAEARERAAEAEAKAT
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TMVSEAIAKGDMQAVNYFIAQGYTEALKAIGQAENGKIIMLPLEATGLMGSVAGIAEMFK
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
SSQTTK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]