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The map label for this gene is ybeD [C]

Identifier: 227081119

GI number: 227081119

Start: 968034

End: 968312

Strand: Reverse

Name: ybeD [C]

Synonym: VCM66_0901

Alternate gene names: 227081119

Gene position: 968312-968034 (Counterclockwise)

Preceding gene: 227081121

Following gene: 227081118

Centisome position: 33.48

GC content: 46.95

Gene sequence:

>279_bases
ATGCTGAACATCAACTCTGATGCGAAATTAAAAGATCTGCTCGAATTCCCATGCTCCTTTACCTACAAAGTGATGGGACA
CGCTAAGCCTGAGCTGCCAGAACGTGTGTTGGAAGTGATTCAACGTCATGCTCCTGGTGACTACAGCCCGCGCGTTAAAC
CCAGCGCTAAGGGTAACTACCATTCGGTGTCGGTAACCATTCACGCGACCTCAATTGAACAAGTAGAGATCCTTTATAAA
GAGCTCGGTGAAATCGATATCGTGCGTATGGTTCTGTAA

Upstream 100 bases:

>100_bases
CAAAAGCCGCTTCATGCGGCTTTTTTGTGAGCTTGAGATCACGCCCGAATGGCTGTAGTATTTCGTCCCGTTTTTCCAAT
GCTCAAACTGGAGTTTCACC

Downstream 100 bases:

>100_bases
AACCACGCTATTATTTTATTTATTCAAATATTTTTGAAAGCAGCTTCGGCTGCTTTTTCTTTATTTTTCAAAAAATTAAC
AAAACCATCATTTTATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLNINSDAKLKDLLEFPCSFTYKVMGHAKPELPERVLEVIQRHAPGDYSPRVKPSAKGNYHSVSVTIHATSIEQVEILYK
ELGEIDIVRMVL

Sequences:

>Translated_92_residues
MLNINSDAKLKDLLEFPCSFTYKVMGHAKPELPERVLEVIQRHAPGDYSPRVKPSAKGNYHSVSVTIHATSIEQVEILYK
ELGEIDIVRMVL
>Mature_92_residues
MLNINSDAKLKDLLEFPCSFTYKVMGHAKPELPERVLEVIQRHAPGDYSPRVKPSAKGNYHSVSVTIHATSIEQVEILYK
ELGEIDIVRMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

Organism=Escherichia coli, GI1786850, Length=85, Percent_Identity=75.2941176470588, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 10406; Mature: 10406

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNINSDAKLKDLLEFPCSFTYKVMGHAKPELPERVLEVIQRHAPGDYSPRVKPSAKGNY
CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCE
HSVSVTIHATSIEQVEILYKELGEIDIVRMVL
EEEEEEEEECCHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MLNINSDAKLKDLLEFPCSFTYKVMGHAKPELPERVLEVIQRHAPGDYSPRVKPSAKGNY
CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCE
HSVSVTIHATSIEQVEILYKELGEIDIVRMVL
EEEEEEEEECCHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA