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The map label for this gene is 227081106

Identifier: 227081106

GI number: 227081106

Start: 954071

End: 955387

Strand: Reverse

Name: 227081106

Synonym: VCM66_0888

Alternate gene names: NA

Gene position: 955387-954071 (Counterclockwise)

Preceding gene: 227081107

Following gene: 227081104

Centisome position: 33.03

GC content: 45.03

Gene sequence:

>1317_bases
ATGCTTTCGTTTCACAAAACTCTATTTTTCGCTTTTTTACTGTTTGTTTTCTGGTTACCAATCCCTCTTGGCAGTAATCG
TCCTTGGGCATGGTCGCTCAATGAAATTTACGTAGCCTTCTTATTATTAGGCTGTTTGTTTCTGCTCCCCGCAGCACAGT
GTTGGCTAGCTATACAACGAGCGAAAGTCATTCTCATCCCAGTGGCGCTTTTTACTCTATGGTCTTGGATGCAAAGTTGG
CCAAGTTTGGGGCTATCATCCGATCAAACTTTGGTGTTTATCTCTGCCGTTAAATCCTTACATTACCTACAAATCTGCTT
GGTTGCCGCGTTATTGGTCGATACCCCTCATAAGCTCAAAATGCTGGCGACCACTATGATCGCAAGTGGTATCTGTCAGG
CCTTCTATGCTGGCGTAATCCTGCTGCTCGAATTGCAAACCTCACCGTTTTTTTCCTTACCGTTAAACCAACGAGCCTCG
GGAAGTTTTGTCTATCATAACCATTTAGCCAATTTTCTAATGCTCAATCTCTGTCTTGGTTTTGGTTTGTTGATTGCTGA
GCTCAATCACCAAACAACACAAGGTTGGAGAAACACCCTAAAAAAATTATTGGCGATACTCCTCTCTGACAAAGCATTTA
TTCGTCTGGGCTTGGTCATTATGGTGATCGCTCTAGTACTCACCCGCTCAAGAATGGGCAATATCGCCTTTTTTGTCGCA
CTCAGTATCGGAAGCTTGCTCATCCTTCTCTTCTATAAATCGAAGCCGAAAAGCCTCTATCTGTTGATCGTGAGCTTATT
TATTGTGGATGCTTTGGTTGTCAGTAACTGGTTTGGCTTAGATAAGGTTCGCCAACGTTTAGCTGAAACCAGTTTGCAAA
ATGAATCGCGGGATGATGTGGTTCGTGATGCCTTGAACGCCATTCAAGAACGTCCCCTTACCGGTTTTGGCAATGGCACG
TTTTACTCCACTTTCCCCTCTTACAATCAAGGCGAAGTGGCGCTTTTTTATGACCATGCACACAACGATTATGTGCAGTT
CACCTTGGAGTCAGGCCTGATTGCCACCAGCGTATTTGGCATCATGGTTTTGTTTTGTGCATGGCGGGCTTTGTCAGCCT
TTCGCAATCGAACCAATAAAACTATGCGTGGCATTGGCCTTGGCAGTTTAATGGCGATCATCGGGATGCTGTTACACATG
AGTGTGGATTTTCCACTGCAAGCCCCAGCCACGGCGCTCTACTTTCTATTTTGTCTATTAATCGCCAATTGGAGCATGAC
GCTTCCTACCCCGAAATACCGCTCATCCAGAACCTGA

Upstream 100 bases:

>100_bases
GCCATGGCATGGCGGAGCAAGTTGAAGGATTTCTCTCATTACCCACTTAAATCGATCAAATCTTTAAGTGGGTAAACTGC
TATTTTGAGCCACCGAATTT

Downstream 100 bases:

>100_bases
TTGCTCTTCATCTCCTGCATGATCACTGCGAAATTGATGACTTATAGAGTAGAAACAATCACTTACGTTCAAAGCGGAGT
TTAGGGATGACAATAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Endo-1 4-Beta-Xylanase Protein; O-Antigen Polymerase Family Protein

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MLSFHKTLFFAFLLFVFWLPIPLGSNRPWAWSLNEIYVAFLLLGCLFLLPAAQCWLAIQRAKVILIPVALFTLWSWMQSW
PSLGLSSDQTLVFISAVKSLHYLQICLVAALLVDTPHKLKMLATTMIASGICQAFYAGVILLLELQTSPFFSLPLNQRAS
GSFVYHNHLANFLMLNLCLGFGLLIAELNHQTTQGWRNTLKKLLAILLSDKAFIRLGLVIMVIALVLTRSRMGNIAFFVA
LSIGSLLILLFYKSKPKSLYLLIVSLFIVDALVVSNWFGLDKVRQRLAETSLQNESRDDVVRDALNAIQERPLTGFGNGT
FYSTFPSYNQGEVALFYDHAHNDYVQFTLESGLIATSVFGIMVLFCAWRALSAFRNRTNKTMRGIGLGSLMAIIGMLLHM
SVDFPLQAPATALYFLFCLLIANWSMTLPTPKYRSSRT

Sequences:

>Translated_438_residues
MLSFHKTLFFAFLLFVFWLPIPLGSNRPWAWSLNEIYVAFLLLGCLFLLPAAQCWLAIQRAKVILIPVALFTLWSWMQSW
PSLGLSSDQTLVFISAVKSLHYLQICLVAALLVDTPHKLKMLATTMIASGICQAFYAGVILLLELQTSPFFSLPLNQRAS
GSFVYHNHLANFLMLNLCLGFGLLIAELNHQTTQGWRNTLKKLLAILLSDKAFIRLGLVIMVIALVLTRSRMGNIAFFVA
LSIGSLLILLFYKSKPKSLYLLIVSLFIVDALVVSNWFGLDKVRQRLAETSLQNESRDDVVRDALNAIQERPLTGFGNGT
FYSTFPSYNQGEVALFYDHAHNDYVQFTLESGLIATSVFGIMVLFCAWRALSAFRNRTNKTMRGIGLGSLMAIIGMLLHM
SVDFPLQAPATALYFLFCLLIANWSMTLPTPKYRSSRT
>Mature_438_residues
MLSFHKTLFFAFLLFVFWLPIPLGSNRPWAWSLNEIYVAFLLLGCLFLLPAAQCWLAIQRAKVILIPVALFTLWSWMQSW
PSLGLSSDQTLVFISAVKSLHYLQICLVAALLVDTPHKLKMLATTMIASGICQAFYAGVILLLELQTSPFFSLPLNQRAS
GSFVYHNHLANFLMLNLCLGFGLLIAELNHQTTQGWRNTLKKLLAILLSDKAFIRLGLVIMVIALVLTRSRMGNIAFFVA
LSIGSLLILLFYKSKPKSLYLLIVSLFIVDALVVSNWFGLDKVRQRLAETSLQNESRDDVVRDALNAIQERPLTGFGNGT
FYSTFPSYNQGEVALFYDHAHNDYVQFTLESGLIATSVFGIMVLFCAWRALSAFRNRTNKTMRGIGLGSLMAIIGMLLHM
SVDFPLQAPATALYFLFCLLIANWSMTLPTPKYRSSRT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49178; Mature: 49178

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA