Click here to switch to the map view.

The map label for this gene is wcaL [C]

Identifier: 227081095

GI number: 227081095

Start: 939799

End: 940947

Strand: Direct

Name: wcaL [C]

Synonym: VCM66_0877

Alternate gene names: 227081095

Gene position: 939799-940947 (Clockwise)

Preceding gene: 227081094

Following gene: 227081096

Centisome position: 32.49

GC content: 42.99

Gene sequence:

>1149_bases
ATGAGTAAAATATTGCTTATCATGCCACTCTCTACGCTCAATTGGGGGGAGAAAAATCTTGGTGGTGTGGATTCAGTATG
CCAAATGTTGGTACGTCAACTCGCTCAGCAAGAGCGTCCATACCATTACCGAGTGTTAGCGTTTGATCCGCTCAACAATC
ACTCTTATTCAGGCGAGATTATCCAGTTGTCAAAACATCTGGAAGTGGTGATTTGTCCGTTGCGGGAAAAGCGATTTGGG
CTGCCTTTGCCTAGCTTATTATCCAATTGGCTCCGCATCCAAGAGCAACTGAAAGACTATCAGCCAGATTTGGTTCACTC
TCATCTCAACAGTTGGATGATGGGACTTGGGCAGAAAACTCGTAATGTGTTGACCTTGCATTCTTATCGCAAGATTGGGC
GTAAGCCAGTTTCAAAACTCAATGATTTTGTTTATGAACAAATCATTCCATGGGTAAGTCATTTTTCCGTCGATTTTTAT
ACTTGTGTTGGCGAAGAGTTGCGTCAAGCGTTATCTCTGGAGACGAATAAGTCAATTCAAGTGATTGGCAATCCAGTCGA
TCCTGACTATTTCTCTGCCAACTCTGCGAACCAGAATCTGCCCCAGAATGAAGTCAATTTAGTCACTTGTGCATTGATTA
CTCGACGCAAGCGTATTGATCGAGCCATTGTATTACTGCGTGAGCTAAAACAGCGAGGGCAAGCGGCTACTTTACGTATT
ATCGGACCCAATATGGATTCTGCTTATTACGCGCAATTGCAGCAATTGATCAAAGAGTATGAGCTTGAACAAGATGTCAT
TTTTCTTGGCAAACTTAATCAGCGTGAAATTGTACAACAGTACCAACAAGCGAATATTGGAATATTTACGTCACAACAAG
AAACGTTCGGCTTAGCGCCATTGGAAATGATGGCGGCGGGCTTGCCATTAATTAGTACTCCTGTCGGGATTTTAGGTGAA
CGGCAAGCAACGTTTGACCAGTTAGGGGTGGTTTTTATGCAAGAAGGGCAGGAAGCGATGATTGCTGAGCGAATCAGTCA
GATAAAAATAACGGATACTCAAGCGATTCAAACCTATTTGCGCGATCAATTCGCAGTAGAAAATGTGATTGAACATTACC
AGAATCTATATCGAGAGGTACTGAGTTGA

Upstream 100 bases:

>100_bases
TTCCCCCAAACTCGGTAGTCGTGGGTAACCCCGGACGCGTACTAACAAGACCAAGCCATAAAACCTATATTCGCCACCCC
GCGCCATTGGAAAGTAAGTC

Downstream 100 bases:

>100_bases
TTGCTAGTCTACTCAAATATGCTCCTGTTCAGGTCTTTTCCGCTCTGAGTGTCTTTGCTCTGATCGCTGTACAAACTCGC
TTTCTCTCTCCGGAACATTA

Product: putative exopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEIIQLSKHLEVVICPLREKRFG
LPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKTRNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFY
TCVGEELRQALSLETNKSIQVIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAPLEMMAAGLPLISTPVGILGE
RQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYLRDQFAVENVIEHYQNLYREVLS

Sequences:

>Translated_382_residues
MSKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEIIQLSKHLEVVICPLREKRFG
LPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKTRNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFY
TCVGEELRQALSLETNKSIQVIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAPLEMMAAGLPLISTPVGILGE
RQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYLRDQFAVENVIEHYQNLYREVLS
>Mature_381_residues
SKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEIIQLSKHLEVVICPLREKRFGL
PLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKTRNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFYT
CVGEELRQALSLETNKSIQVIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRII
GPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAPLEMMAAGLPLISTPVGILGER
QATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYLRDQFAVENVIEHYQNLYREVLS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43818; Mature: 43687

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEI
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH
IQLSKHLEVVICPLREKRFGLPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKT
EEECCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
RNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFYTCVGEELRQALSLETNKSIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEE
VIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAP
ECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEECCCHHCCCCH
LEMMAAGLPLISTPVGILGERQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYL
HHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCHHHHHHHHH
RDQFAVENVIEHYQNLYREVLS
HHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEI
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH
IQLSKHLEVVICPLREKRFGLPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKT
EEECCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHH
RNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFYTCVGEELRQALSLETNKSIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEE
VIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAP
ECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEECCCHHCCCCH
LEMMAAGLPLISTPVGILGERQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYL
HHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCHHHHHHHHH
RDQFAVENVIEHYQNLYREVLS
HHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA