| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081090
Identifier: 227081090
GI number: 227081090
Start: 935687
End: 935797
Strand: Direct
Name: 227081090
Synonym: VCM66_0872
Alternate gene names: NA
Gene position: 935687-935797 (Clockwise)
Preceding gene: 227081089
Following gene: 227081091
Centisome position: 32.35
GC content: 36.04
Gene sequence:
>111_bases ATGGATATTGTTGTATTAGCAATATCCATCCATTTTTTGTTTTCCTATCCTTATCCTATTGATGCAGCCGTGTTATTTAC GTTGATGATTATGCACTCGATGACCACCTAG
Upstream 100 bases:
>100_bases CAACCATGAGCTGCAACAAGATGTGAAAGGCCGCGCTCAACACTAAAATTGGTTATCCCATCGCTTTGTACGGTGGGAAG ATTTATATCTGCTGCAATGG
Downstream 100 bases:
>100_bases CTGCAACTTTAAGTCTTTTGGGCATTTAACGAAGATGTCAACCTTCATTTATTAGTAAATATGCCCTGTCGTATTATTGA TTCAAATCGATGGCTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 36
Protein sequence:
>36_residues MDIVVLAISIHFLFSYPYPIDAAVLFTLMIMHSMTT
Sequences:
>Translated_36_residues MDIVVLAISIHFLFSYPYPIDAAVLFTLMIMHSMTT >Mature_36_residues MDIVVLAISIHFLFSYPYPIDAAVLFTLMIMHSMTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4103; Mature: 4103
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 11.1 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 11.1 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVVLAISIHFLFSYPYPIDAAVLFTLMIMHSMTT CCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIVVLAISIHFLFSYPYPIDAAVLFTLMIMHSMTT CCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA