Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is 227081087

Identifier: 227081087

GI number: 227081087

Start: 931182

End: 931277

Strand: Direct

Name: 227081087

Synonym: VCM66_0869

Alternate gene names: NA

Gene position: 931182-931277 (Clockwise)

Preceding gene: 227081086

Following gene: 227081088

Centisome position: 32.19

GC content: 40.62

Gene sequence:

>96_bases
GTGTTTTCTTTTCATTTTCTGAAAAGCTTAAGTGATGTTTTCCCAACACATCGCTCAAGTGCGGAGCGCATCTTATCAAA
CTCGCTCTCTCTGTAA

Upstream 100 bases:

>100_bases
ACGAGAATAATATGGTGGAGGGGGACGGATTCGAACCATCGAAGGCGGAGCCGGCAGATTTACAGTCTGCTCCCTTTGGC
CACTCGGGAACCCCTCCAGG

Downstream 100 bases:

>100_bases
ACTGTTTTTTTAGCAAATTGAATCGAATGATGGCTTTTTGGGCAAAGACGCAAATAATTGACCATTTTAGCTGCTTAAGT
CACAGCGAACCTTACACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 31; Mature: 31

Protein sequence:

>31_residues
MFSFHFLKSLSDVFPTHRSSAERILSNSLSL

Sequences:

>Translated_31_residues
MFSFHFLKSLSDVFPTHRSSAERILSNSLSL
>Mature_31_residues
MFSFHFLKSLSDVFPTHRSSAERILSNSLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3555; Mature: 3555

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFHFLKSLSDVFPTHRSSAERILSNSLSL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MFSFHFLKSLSDVFPTHRSSAERILSNSLSL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA