| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081060
Identifier: 227081060
GI number: 227081060
Start: 901819
End: 902442
Strand: Direct
Name: 227081060
Synonym: VCM66_0841
Alternate gene names: NA
Gene position: 901819-902442 (Clockwise)
Preceding gene: 227081056
Following gene: 227081063
Centisome position: 31.18
GC content: 48.08
Gene sequence:
>624_bases ATGGACGAGGTCATTGTTAATAAAAATAGCGCCTTTCTATCTGGGAAGGCGCTATTTCCGTTTGATTTTTCTGCTATACA AGGAATGTCCGTGACCATAGCGACCCGAAGAACGCTACTTATCCCTTACACTGAGGCGTTTGAGTCAGATTTTCTGGTGC TCAATTATTGTGCGAAAAACCGTGCCCTGATGAACGGGCCGACGACCGTAGCGGCAGCGAAACAGCTTTTTCAGCGGGTA TTGCATGATTCTTCACTGTACGCGATGGCCGTGCTGGATAACTATAACCGTGAGTACATGGGGCATGTCTTCATCGAATT TGAGAGTGAAGGGCGCGCTGAGTTGGGCTTTCTATTTGATAAAGCCTACTGGGGACAAGGATTCGCCAGTGAAGCGTTGA ATGCCTTTTTCCCCAATATGTGTCAGCGTTTTGGTTTACAGCGTGTGGTCGCAACTATTAAAGCGCAACATGAAGCTGCG CGTACTATTTTGCAAAAGCTCGGTTTTATCCACGCCATGGATGTGGATGAATTTTATGGCCCATGTAGCCAATTTGTCTG GACGGCTGAAGCGGATAGGCTTAGCCCATCCGGTGCGGTGGCAGAGCAAAACCTACCGTTCTAA
Upstream 100 bases:
>100_bases CAATATTGGCTAACAAAAAAATAAGCGCATATCAGGTTCTTGATAAACCATAAAAATAACAACGTCAGCAGGCTTTACCT CGTGTCATTCGATCCTTGAT
Downstream 100 bases:
>100_bases ATCCTCGCATTTCTAACTGACCTTGGTAACAATCGTCGCCAAGTGAGGAAAACTCAAACAAATAAATGGTGTGCCAACGC CACTGGCCAGAGGGCGTTTT
Product: acetyltransferase-related protein
Products: NA
Alternate protein names: Acetyltransferase-Related Protein; Acetyltransferase-Like Protein
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MDEVIVNKNSAFLSGKALFPFDFSAIQGMSVTIATRRTLLIPYTEAFESDFLVLNYCAKNRALMNGPTTVAAAKQLFQRV LHDSSLYAMAVLDNYNREYMGHVFIEFESEGRAELGFLFDKAYWGQGFASEALNAFFPNMCQRFGLQRVVATIKAQHEAA RTILQKLGFIHAMDVDEFYGPCSQFVWTAEADRLSPSGAVAEQNLPF
Sequences:
>Translated_207_residues MDEVIVNKNSAFLSGKALFPFDFSAIQGMSVTIATRRTLLIPYTEAFESDFLVLNYCAKNRALMNGPTTVAAAKQLFQRV LHDSSLYAMAVLDNYNREYMGHVFIEFESEGRAELGFLFDKAYWGQGFASEALNAFFPNMCQRFGLQRVVATIKAQHEAA RTILQKLGFIHAMDVDEFYGPCSQFVWTAEADRLSPSGAVAEQNLPF >Mature_207_residues MDEVIVNKNSAFLSGKALFPFDFSAIQGMSVTIATRRTLLIPYTEAFESDFLVLNYCAKNRALMNGPTTVAAAKQLFQRV LHDSSLYAMAVLDNYNREYMGHVFIEFESEGRAELGFLFDKAYWGQGFASEALNAFFPNMCQRFGLQRVVATIKAQHEAA RTILQKLGFIHAMDVDEFYGPCSQFVWTAEADRLSPSGAVAEQNLPF
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23213; Mature: 23213
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEVIVNKNSAFLSGKALFPFDFSAIQGMSVTIATRRTLLIPYTEAFESDFLVLNYCAKN CCCEEECCCCCEEECCEECCCCHHHHCCCEEEEEECEEEEEEEHHHHCCCEEEEEEHHCC RALMNGPTTVAAAKQLFQRVLHDSSLYAMAVLDNYNREYMGHVFIEFESEGRAELGFLFD CEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEEECCCCCCHHHHHHH KAYWGQGFASEALNAFFPNMCQRFGLQRVVATIKAQHEAARTILQKLGFIHAMDVDEFYG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHC PCSQFVWTAEADRLSPSGAVAEQNLPF CHHHHEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDEVIVNKNSAFLSGKALFPFDFSAIQGMSVTIATRRTLLIPYTEAFESDFLVLNYCAKN CCCEEECCCCCEEECCEECCCCHHHHCCCEEEEEECEEEEEEEHHHHCCCEEEEEEHHCC RALMNGPTTVAAAKQLFQRVLHDSSLYAMAVLDNYNREYMGHVFIEFESEGRAELGFLFD CEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEEECCCCCCHHHHHHH KAYWGQGFASEALNAFFPNMCQRFGLQRVVATIKAQHEAARTILQKLGFIHAMDVDEFYG HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHC PCSQFVWTAEADRLSPSGAVAEQNLPF CHHHHEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA