| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is ppnK
Identifier: 227081029
GI number: 227081029
Start: 875979
End: 876863
Strand: Reverse
Name: ppnK
Synonym: VCM66_0810
Alternate gene names: 227081029
Gene position: 876863-875979 (Counterclockwise)
Preceding gene: 227081033
Following gene: 227081028
Centisome position: 30.31
GC content: 46.89
Gene sequence:
>885_bases ATGAAAAAGCCGTTCAACGTTCTTGCCATCATTGGAAAACCGCGCGATCAACAAGCCATTCAAACTCATAAAGAGATTTA CCACTGGCTAAGATCGCTCGGATATACCGTGTTTATCGATGATCGTTTACGGGAAATTCTGACCGATTTACCCACCGAAC ATTTTGCAAGCCTGATTGAACTGGGCAAAAAAGCCGATTTGGCGATTGTGGTCGGTGGCGATGGCAACATGCTTGGTGCT GCGCGCGTGTTGTCCCGCTTTGATATCAGTGTGATCGGGGTTAATCGTGGCAATTTAGGCTTTTTGACCGATTTAAACCC AGAAGATTTCCAACAGCGCTTACAAGAAGTGTTGGATGGTCACTATTTGCAAGAAACTCGCTTTTTGCTTGAAGCGGAAA TCCATCGCCACGGTCAAGTGAAAAGCCATAATGCCGCCTTGAATGAAGCCGTGCTTCATCCAGGAAAAATAGCGCATATG ATTGAATTTGAAGTCTATATTGATGATAACTTCGCTTTCTCTCAGCGCTCCGATGGGTTAATTGTCTCAACCCCAACCGG CTCGACTGCTTATTCACTTTCCGGCGGAGGCCCGATCCTCTCGCCAAGCCTGAATGCCATTACTTTAGTGCCTATGTTTC CGCATACCCTCTCCTGCCGCCCATTAGTGGTGGGCGGAAATCAACGCATTAAACTGGTGGTTTCTCCTGAAAATCGCGGC ACTCAAGAAGTGAGCTGTGATGGACAAGTCTCATTACCTGTGTCGCCTGGTGATGAAATCCACATCTATCAAAGCCCTAA TGTGCTGAAACTGATCCATCCTCAAGACTACAGTTACTACCACGTATTGCGTACTAAGCTTGGCTGGTCGAGCAAACTGT TTTGA
Upstream 100 bases:
>100_bases ATCGTCGATTTCCCAACACAAAAATTCGCATAAAAGCACAACTTGCCCTTATTATGGGGACGATGAATTCTGATTCAAGC CTAAATCGGTTGGAAACCTT
Downstream 100 bases:
>100_bases TTTCGTTCACAGATTTTGCTCATAGAGCGTAAAAGTGACCAAAAAATTTTACCTGAGTGACTTTACTGTATAAAGAAACA GTATAAACTGTTTAAACATA
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKKPFNVLAIIGKPRDQQAIQTHKEIYHWLRSLGYTVFIDDRLREILTDLPTEHFASLIELGKKADLAIVVGGDGNMLGA ARVLSRFDISVIGVNRGNLGFLTDLNPEDFQQRLQEVLDGHYLQETRFLLEAEIHRHGQVKSHNAALNEAVLHPGKIAHM IEFEVYIDDNFAFSQRSDGLIVSTPTGSTAYSLSGGGPILSPSLNAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRG TQEVSCDGQVSLPVSPGDEIHIYQSPNVLKLIHPQDYSYYHVLRTKLGWSSKLF
Sequences:
>Translated_294_residues MKKPFNVLAIIGKPRDQQAIQTHKEIYHWLRSLGYTVFIDDRLREILTDLPTEHFASLIELGKKADLAIVVGGDGNMLGA ARVLSRFDISVIGVNRGNLGFLTDLNPEDFQQRLQEVLDGHYLQETRFLLEAEIHRHGQVKSHNAALNEAVLHPGKIAHM IEFEVYIDDNFAFSQRSDGLIVSTPTGSTAYSLSGGGPILSPSLNAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRG TQEVSCDGQVSLPVSPGDEIHIYQSPNVLKLIHPQDYSYYHVLRTKLGWSSKLF >Mature_294_residues MKKPFNVLAIIGKPRDQQAIQTHKEIYHWLRSLGYTVFIDDRLREILTDLPTEHFASLIELGKKADLAIVVGGDGNMLGA ARVLSRFDISVIGVNRGNLGFLTDLNPEDFQQRLQEVLDGHYLQETRFLLEAEIHRHGQVKSHNAALNEAVLHPGKIAHM IEFEVYIDDNFAFSQRSDGLIVSTPTGSTAYSLSGGGPILSPSLNAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRG TQEVSCDGQVSLPVSPGDEIHIYQSPNVLKLIHPQDYSYYHVLRTKLGWSSKLF
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=330, Percent_Identity=29.0909090909091, Blast_Score=112, Evalue=3e-25, Organism=Escherichia coli, GI1788968, Length=294, Percent_Identity=58.5034013605442, Blast_Score=355, Evalue=1e-99, Organism=Caenorhabditis elegans, GI71999610, Length=144, Percent_Identity=34.7222222222222, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320794, Length=317, Percent_Identity=29.6529968454259, Blast_Score=138, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6322509, Length=240, Percent_Identity=30.8333333333333, Blast_Score=125, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6325068, Length=213, Percent_Identity=30.9859154929577, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI28573826, Length=254, Percent_Identity=32.6771653543307, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573832, Length=254, Percent_Identity=32.6771653543307, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573828, Length=254, Percent_Identity=32.6771653543307, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573830, Length=254, Percent_Identity=32.6771653543307, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI161077047, Length=254, Percent_Identity=32.6771653543307, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI24653424, Length=278, Percent_Identity=28.4172661870504, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI281363321, Length=278, Percent_Identity=28.4172661870504, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24653422, Length=278, Percent_Identity=28.4172661870504, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI281363323, Length=278, Percent_Identity=28.4172661870504, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI20129957, Length=278, Percent_Identity=28.4172661870504, Blast_Score=107, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK_VIBC3 (A5F368)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F368 - SMR: A5F368 - STRING: A5F368 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0379 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: FESFMID - ProtClustDB: PRK03378 - BioCyc: VCHO345073:VC0395_A0379-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 32699; Mature: 32699
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPFNVLAIIGKPRDQQAIQTHKEIYHWLRSLGYTVFIDDRLREILTDLPTEHFASLIE CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHH LGKKADLAIVVGGDGNMLGAARVLSRFDISVIGVNRGNLGFLTDLNPEDFQQRLQEVLDG CCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCC HYLQETRFLLEAEIHRHGQVKSHNAALNEAVLHPGKIAHMIEFEVYIDDNFAFSQRSDGL CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCEEECCCCCCE IVSTPTGSTAYSLSGGGPILSPSLNAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRG EEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCC TQEVSCDGQVSLPVSPGDEIHIYQSPNVLKLIHPQDYSYYHVLRTKLGWSSKLF CCEECCCCEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEEHHCCCCCCCC >Mature Secondary Structure MKKPFNVLAIIGKPRDQQAIQTHKEIYHWLRSLGYTVFIDDRLREILTDLPTEHFASLIE CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHH LGKKADLAIVVGGDGNMLGAARVLSRFDISVIGVNRGNLGFLTDLNPEDFQQRLQEVLDG CCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCC HYLQETRFLLEAEIHRHGQVKSHNAALNEAVLHPGKIAHMIEFEVYIDDNFAFSQRSDGL CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCEEECCCCCCE IVSTPTGSTAYSLSGGGPILSPSLNAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRG EEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCC TQEVSCDGQVSLPVSPGDEIHIYQSPNVLKLIHPQDYSYYHVLRTKLGWSSKLF CCEECCCCEEEEECCCCCEEEEEECCCEEEEECCCCCCEEEEEEHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA