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The map label for this gene is 227081019

Identifier: 227081019

GI number: 227081019

Start: 861618

End: 862091

Strand: Direct

Name: 227081019

Synonym: VCM66_0799

Alternate gene names: NA

Gene position: 861618-862091 (Clockwise)

Preceding gene: 227081018

Following gene: 227081020

Centisome position: 29.79

GC content: 30.17

Gene sequence:

>474_bases
ATGTACTCTCCTATGAAATTTTTCGTAGGAACTAATATGAATCAAAGAGTTAGTGTTATTTATGCTACTTTCTGGGATAG
ACTATGGGCATCATTGATTGATAGTTTAGTGCTATCGGTATTAATTCTAGCTGTCATTTTGTTTATATTTAATGTCTTTG
ATGTGGATGTTGCAATAAACAGTAGATACGTCGATATCGCTAATTTATCTTTATCACTTTGCATTACTATTTTATTTTGG
AATTTTAAATCTGCAACACCTGGCAAGATGCTCTTAAAATTAAAAGTTGTTGATGAGCATACTCTTAATAAGTTGACATT
TAAGCAATCTATAATTCGTTATTTGTCATATTATATTAGTCTGTTAGGCTTTTTCATCGGCTTTTTCTGGATTTTCTTTA
ACAAAAAAAATCAAGGATGGCATGATAAAATCGCAAAGACCATCGTAATAAAATTGCCATCTAGTACTCAGTAA

Upstream 100 bases:

>100_bases
TAGTGAAGCGATTGACTTTTTTGATTATCTAACAAAAAGCAAAGACGCTGAAGCAATCTTTCAGCACTATGGCTGGTTTA
AGTGATTTTAGGGAGAGTAC

Downstream 100 bases:

>100_bases
TATTTAAAATGAATAAGACACTTAGGATTACATTATTATCTATATCTGGTTCAAAAACATTTAACATAAAATTCAGACAT
AGAGTGTTTTTACATTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MYSPMKFFVGTNMNQRVSVIYATFWDRLWASLIDSLVLSVLILAVILFIFNVFDVDVAINSRYVDIANLSLSLCITILFW
NFKSATPGKMLLKLKVVDEHTLNKLTFKQSIIRYLSYYISLLGFFIGFFWIFFNKKNQGWHDKIAKTIVIKLPSSTQ

Sequences:

>Translated_157_residues
MYSPMKFFVGTNMNQRVSVIYATFWDRLWASLIDSLVLSVLILAVILFIFNVFDVDVAINSRYVDIANLSLSLCITILFW
NFKSATPGKMLLKLKVVDEHTLNKLTFKQSIIRYLSYYISLLGFFIGFFWIFFNKKNQGWHDKIAKTIVIKLPSSTQ
>Mature_157_residues
MYSPMKFFVGTNMNQRVSVIYATFWDRLWASLIDSLVLSVLILAVILFIFNVFDVDVAINSRYVDIANLSLSLCITILFW
NFKSATPGKMLLKLKVVDEHTLNKLTFKQSIIRYLSYYISLLGFFIGFFWIFFNKKNQGWHDKIAKTIVIKLPSSTQ

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010432 [H]

Pfam domain/function: PF06271 RDD [H]

EC number: NA

Molecular weight: Translated: 18253; Mature: 18253

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSPMKFFVGTNMNQRVSVIYATFWDRLWASLIDSLVLSVLILAVILFIFNVFDVDVAIN
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
SRYVDIANLSLSLCITILFWNFKSATPGKMLLKLKVVDEHTLNKLTFKQSIIRYLSYYIS
CEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LLGFFIGFFWIFFNKKNQGWHDKIAKTIVIKLPSSTQ
HHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCC
>Mature Secondary Structure
MYSPMKFFVGTNMNQRVSVIYATFWDRLWASLIDSLVLSVLILAVILFIFNVFDVDVAIN
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
SRYVDIANLSLSLCITILFWNFKSATPGKMLLKLKVVDEHTLNKLTFKQSIIRYLSYYIS
CEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LLGFFIGFFWIFFNKKNQGWHDKIAKTIVIKLPSSTQ
HHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]