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The map label for this gene is tcpQ

Identifier: 227081007

GI number: 227081007

Start: 849947

End: 850399

Strand: Direct

Name: tcpQ

Synonym: VCM66_0787

Alternate gene names: 227081007

Gene position: 849947-850399 (Clockwise)

Preceding gene: 227081006

Following gene: 227081008

Centisome position: 29.38

GC content: 35.76

Gene sequence:

>453_bases
ATGAAAAAAAACTATTACATAGGTGCATGCATCGCGCTCATATTAAGCGGGCCAACCTTTGCACAAGGAGAGATGCACAA
TACAAATGAGCAGATTGCAGAACAGTCCTCAGTTGATTTAATCGCAGAAATTTATCATTCAGACCGATATGCAGAAACGT
TTGTTGAATCCGAACAGTTCGAACAAGAAGAAAGCACATCAAAAGAACCTATCTTGTTTGTTACACCTTATGATCAATTG
AAAGATAAATTGGAATCTTGGGCTGATTTACACGGTTATGTTGTGAAATGGAATACACAGAAAACGGTTCAGTTCGATAA
TGCGGTGGCTTATGAAGGAGACTTTGAACAAGTTTTAACTGAGTTGGCTAGCGATATTAACCAAATTGGCATAGACATTA
ACTTTAAAATATTTCAAAAAAATAAAGTTATTGTCGTCTATTCAGTGAGATAA

Upstream 100 bases:

>100_bases
TCGAGTCCGGTATATTGCCTACTTCAGGTATCGATTCTGGATCGTTATTACGAAACCCTAAATCATTGTCTTTTATAGCG
TTTCAATGGTGTGAAAATTA

Downstream 100 bases:

>100_bases
GTATGAAAAAAACAATAATCAGTACACTTGTTATCGGTTTGGTTTCCGGTTGTTCTAATACGAACTTGCTAAAAGACAAT
CTGGCTAGCGAGCAAAGTGT

Product: toxin co-regulated pilus biosynthesis protein Q

Products: NA

Alternate protein names: TCP pilus biosynthesis protein tcpQ

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQFEQEESTSKEPILFVTPYDQL
KDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLTELASDINQIGIDINFKIFQKNKVIVVYSVR

Sequences:

>Translated_150_residues
MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQFEQEESTSKEPILFVTPYDQL
KDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLTELASDINQIGIDINFKIFQKNKVIVVYSVR
>Mature_150_residues
MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQFEQEESTSKEPILFVTPYDQL
KDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLTELASDINQIGIDINFKIFQKNKVIVVYSVR

Specific function: Involved in TCP pilus biogenesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TCPQ_VIBCH (P29490)

Other databases:

- EMBL:   X64098
- EMBL:   X74730
- EMBL:   AE003852
- PIR:   JC4723
- PIR:   S23266
- RefSeq:   NP_230478.1
- GeneID:   2614497
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC0830
- TIGR:   VC_0830
- HOGENOM:   HBG739729
- OMA:   ETFIESE
- ProtClustDB:   CLSK793807
- InterPro:   IPR018927

Pfam domain/function: PF10671 TcpQ

EC number: NA

Molecular weight: Translated: 17242; Mature: 17242

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
HHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEECCCHHHHHH
ELASDINQIGIDINFKIFQKNKVIVVYSVR
HHHHHHHHHCCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQF
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EQEESTSKEPILFVTPYDQLKDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLT
HHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEECCCHHHHHH
ELASDINQIGIDINFKIFQKNKVIVVYSVR
HHHHHHHHHCCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8621096; 10952301