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The map label for this gene is fdx [H]

Identifier: 227080932

GI number: 227080932

Start: 763040

End: 763459

Strand: Direct

Name: fdx [H]

Synonym: VCM66_0711

Alternate gene names: 227080932

Gene position: 763040-763459 (Clockwise)

Preceding gene: 227080931

Following gene: 227080933

Centisome position: 26.38

GC content: 48.57

Gene sequence:

>420_bases
TTGCGTCAAGACGAATGGATAAATCGATTCGTAGCGCACTGGCTGGCCACTCCGTTGACGAGATTTGAAGAGATTACCAA
CATGCCTAAGATTATTGTTTTGCCTCATGAAACCCTTTGCCCGGAAGGCGCAGTGTTAGAAGCGCAAACCGGGGAAACGA
TTCTTGATGTGGCACTCAAAAACGGTATCGCTATTGAGCATGCGTGTGAGAAATCGTGCGCTTGTACTACTTGCCACTGT
ATCGTTCGAGAAGGGTTTGATTCACTGGAAGAGAGTGATGAGCTGGAAGACGATATGCTGGATAAAGCTTGGGGTTTGGA
GCCAGAATCTCGTCTCAGCTGTCAGGCTCGAGTGGCGGATGAAGATCTCGTCGTCGAGATCCCGAAATACACGCTAAACC
ACGCAAGCGAAGATCATTAA

Upstream 100 bases:

>100_bases
TTATTACAGGCGATCGAGCGCTTGATTGAACTGCGCAATGGCGATAATGCGGATGCCATTGAGCAAGGAATAAAAGACAC
AGACAAAGCGAGTCAGGATT

Downstream 100 bases:

>100_bases
TTCTTAGCCTCGGTCGCAGCCGAGGTAAAACCAATAGGAAGGCTAACCATGAAATGGACAGATTCACGCGATATCGCGAT
TGAGCTGTGTGACAAGTTTC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRQDEWINRFVAHWLATPLTRFEEITNMPKIIVLPHETLCPEGAVLEAQTGETILDVALKNGIAIEHACEKSCACTTCHC
IVREGFDSLEESDELEDDMLDKAWGLEPESRLSCQARVADEDLVVEIPKYTLNHASEDH

Sequences:

>Translated_139_residues
MRQDEWINRFVAHWLATPLTRFEEITNMPKIIVLPHETLCPEGAVLEAQTGETILDVALKNGIAIEHACEKSCACTTCHC
IVREGFDSLEESDELEDDMLDKAWGLEPESRLSCQARVADEDLVVEIPKYTLNHASEDH
>Mature_139_residues
MRQDEWINRFVAHWLATPLTRFEEITNMPKIIVLPHETLCPEGAVLEAQTGETILDVALKNGIAIEHACEKSCACTTCHC
IVREGFDSLEESDELEDDMLDKAWGLEPESRLSCQARVADEDLVVEIPKYTLNHASEDH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=97, Percent_Identity=40.2061855670103, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=84.5454545454545, Blast_Score=197, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17544202, Length=97, Percent_Identity=38.1443298969072, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=91, Percent_Identity=43.956043956044, Blast_Score=75, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24661503, Length=97, Percent_Identity=40.2061855670103, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 15692; Mature: 15692

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQDEWINRFVAHWLATPLTRFEEITNMPKIIVLPHETLCPEGAVLEAQTGETILDVALK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCEEECCCCCHHHHHHHH
NGIAIEHACEKSCACTTCHCIVREGFDSLEESDELEDDMLDKAWGLEPESRLSCQARVAD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCC
EDLVVEIPKYTLNHASEDH
CCEEEECCCHHHCCCCCCC
>Mature Secondary Structure
MRQDEWINRFVAHWLATPLTRFEEITNMPKIIVLPHETLCPEGAVLEAQTGETILDVALK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCEEECCCCCHHHHHHHH
NGIAIEHACEKSCACTTCHCIVREGFDSLEESDELEDDMLDKAWGLEPESRLSCQARVAD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEECCC
EDLVVEIPKYTLNHASEDH
CCEEEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]