| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is pstC-1 [H]
Identifier: 227080903
GI number: 227080903
Start: 736558
End: 738753
Strand: Direct
Name: pstC-1 [H]
Synonym: VCM66_0682
Alternate gene names: 227080903
Gene position: 736558-738753 (Clockwise)
Preceding gene: 227080900
Following gene: 227080904
Centisome position: 25.46
GC content: 50.14
Gene sequence:
>2196_bases ATGGTCAGACAGCCATTTTCATTGAAAGAACGTGATCGCGCGCGGTTAGTGAAAGACCGTGTGGTGCGTTTTGCAGTGAC TTGTGGTGGCGTCAGTGTGTTGGGAGCTTTGGTACTGATTTTTATCTATTTAGCCATGGTTGTGGTGCCACTGTTTGGCG ATGCGAAATGGCGTGGTGACATTGCGGTTAAGACGGTATCAACAACAGATCCGTTACTGATGACCATAGGTGCTTACGGT GAAAACGCGTTTTTGATGTCAAATGATGGCGTTGGGCAGTTTTGGTCATTACGTTCTGTCAGCGATCAACCTATCCAGAC CCAATCGTTAGGCTTTACGCCTGTACTGTGGGCACAAACACCCCCTGCTCAAGGTTGGTTTGCCTTGGTAGGTCAGGATA ACCAAGTGGCCGTTGTGCATCCGCAGCTCTCCCATTCAATGACAACTCAGGGGCGTGAATTCACCCCGAGCTTGGAACGT TTAGCCTTGCCGGAAGCGTTCCGCTTAAGTGAGCAGCCTCTGCAACAATTCGCTTTTGCCTTAACTGCGGAAGCGCTTAT TTTTGCCACGTACGATAACGCGCAGCAGATCCAGATTTTGCGTTTGGATCGCGCGACGCAACAAGAGATTAGCCGTCTGA GTTTGAGTGTGCCGTTCAGCGATCTCAGCCAGTTATTGCTGACCCCAGATGGTAAGACCCTGTATTTGCGTACCCGATCT GAGCTTGTCGTCGCATTACTGGATAAGCAGAGTTATCAGATCCGCGAAATCGTCGATCTCAGTGAAGGCGATAGCCGTCA TCAAGTCACGCAACTCTATTTGTTATCAGGGGCGTTCTCTTTACTGGCGGTGCACGAAGATGGTCTGGTGTCACAGTGGT TTGATGTGCTGCGCGATGGTCAGCGTCATTTAAACCATATCCGCAATTTTAAGCTCGCCTCAGAAGTGCAGTTTTTGTTG CCCGATACCAACACGAAAGGTTTCTACAGCTTCTATCGCAATGGCACTTTGCAAAGCCATTACACCACGAGTGAAAAGTT GGTGCTGTTTGAGCGTGCTTATCAACGAGCGCCACAGTTGGTGGCGATGTCCGAGAATCAAGCGTATTTGGCGAGTTATG ACCAAGGGAAAATTCGGTTAGCGCAGGTGGAAAACCGAAACCCTGAAGTCTCCTTTTCTGCGTTGTGGCAAAAAGTGTGG TACGAAAGTTACCCTGAACCAGAGTTTGTTTGGCAATCCACCGCAGCAACGGACGATTTTGAAGCTAAGTTTAGTTTAGT GCCGATTGCTTTTGGCACCTTAAAAGCCGCAGCCTTTGCCATGTTGTTTGCGATGCCGATTGCGGTATTAGGCGCGATTT ATACCGCCTATTTTATGACGCCTTCGATGCGCCGCGTGGTGAAACCGACCATTGAATTGATGGAAGCCCTACCCACGGTG ATTATCGGTTTTCTTGCGGGGCTATGGTTTGCACCGTTTGTGGAGAGCCATTTGCCCGCAGTATTGGCGCTGATGATTTT GTTACCGCCTTCAACCATAGTGCTCGGGTTCATTTGGTCGCGCTTACCCAAAGCTTGGCTGCGCCGTATCCCCAGTGGTT GGCATGCGCTGATTTTAATCCCAGTGTTGATTGGTATATCAGCCCTGATTCTGTCTTACAGTGGTGAGCTGGAAAACGCT CTGTTTGCGGGTGATCTGCGCGTGTATTTAGCGCAGCACGGTATCGGTTACGATCAGCGCAATGCGCTTGTTGTTGGTTT TGCGATGGGGTTTGCGGTGATCCCAACCATTTTTACCATTGCGGAAGATGCGATTTTCTCAGTGCCGAAACATCTGTCAG ATGGCTCTTTGGCGCTGGGGGCGACACCATGGCAGACCTTGATTTATGTGGTACTGCTTACGGCAAGCCCTGGGATTTTT TCGGCGATCATGATGGGGCTCGGGCGTGCCGTCGGTGAGACCATGATAGTGCTGATGGCCACGGGTAATACCCCGTTGTT GGATTGGAATATTTTTGAAGGCATGCGAACCTTATCGGCGACGATTGCTGTTGAACTGCCAGAATCGGAAGTGCAAAGCG CCCATTTCCGTATCCTATTTTTGGCCGCGCTGCTGCTGCTGACCTTTACGTTTGCGGTGAATTCCCTAGCGGAATGGGTA CGTCAACGGCTACGAGAAAAATACCGTTCTTTATGA
Upstream 100 bases:
>100_bases TAGAGTTGTTTTGATTTCAGTAATTTATTGTGAGCTGTAATATAATTGTCACCCAACCGCAATATTATGACACTCCCCAA AACTATAGGTAATCTCAAGC
Downstream 100 bases:
>100_bases TGGAGCAATATGTTGAATTGGTTTAAATCCGGTGCTCCGTGGATCTGGCTGACAGGAGGAGCCGTCAGCGTCAGCTTGAT TGCTGTACTTGGCCTATTAC
Product: phosphate ABC transporter, permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MVRQPFSLKERDRARLVKDRVVRFAVTCGGVSVLGALVLIFIYLAMVVVPLFGDAKWRGDIAVKTVSTTDPLLMTIGAYG ENAFLMSNDGVGQFWSLRSVSDQPIQTQSLGFTPVLWAQTPPAQGWFALVGQDNQVAVVHPQLSHSMTTQGREFTPSLER LALPEAFRLSEQPLQQFAFALTAEALIFATYDNAQQIQILRLDRATQQEISRLSLSVPFSDLSQLLLTPDGKTLYLRTRS ELVVALLDKQSYQIREIVDLSEGDSRHQVTQLYLLSGAFSLLAVHEDGLVSQWFDVLRDGQRHLNHIRNFKLASEVQFLL PDTNTKGFYSFYRNGTLQSHYTTSEKLVLFERAYQRAPQLVAMSENQAYLASYDQGKIRLAQVENRNPEVSFSALWQKVW YESYPEPEFVWQSTAATDDFEAKFSLVPIAFGTLKAAAFAMLFAMPIAVLGAIYTAYFMTPSMRRVVKPTIELMEALPTV IIGFLAGLWFAPFVESHLPAVLALMILLPPSTIVLGFIWSRLPKAWLRRIPSGWHALILIPVLIGISALILSYSGELENA LFAGDLRVYLAQHGIGYDQRNALVVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIF SAIMMGLGRAVGETMIVLMATGNTPLLDWNIFEGMRTLSATIAVELPESEVQSAHFRILFLAALLLLTFTFAVNSLAEWV RQRLREKYRSL
Sequences:
>Translated_731_residues MVRQPFSLKERDRARLVKDRVVRFAVTCGGVSVLGALVLIFIYLAMVVVPLFGDAKWRGDIAVKTVSTTDPLLMTIGAYG ENAFLMSNDGVGQFWSLRSVSDQPIQTQSLGFTPVLWAQTPPAQGWFALVGQDNQVAVVHPQLSHSMTTQGREFTPSLER LALPEAFRLSEQPLQQFAFALTAEALIFATYDNAQQIQILRLDRATQQEISRLSLSVPFSDLSQLLLTPDGKTLYLRTRS ELVVALLDKQSYQIREIVDLSEGDSRHQVTQLYLLSGAFSLLAVHEDGLVSQWFDVLRDGQRHLNHIRNFKLASEVQFLL PDTNTKGFYSFYRNGTLQSHYTTSEKLVLFERAYQRAPQLVAMSENQAYLASYDQGKIRLAQVENRNPEVSFSALWQKVW YESYPEPEFVWQSTAATDDFEAKFSLVPIAFGTLKAAAFAMLFAMPIAVLGAIYTAYFMTPSMRRVVKPTIELMEALPTV IIGFLAGLWFAPFVESHLPAVLALMILLPPSTIVLGFIWSRLPKAWLRRIPSGWHALILIPVLIGISALILSYSGELENA LFAGDLRVYLAQHGIGYDQRNALVVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIF SAIMMGLGRAVGETMIVLMATGNTPLLDWNIFEGMRTLSATIAVELPESEVQSAHFRILFLAALLLLTFTFAVNSLAEWV RQRLREKYRSL >Mature_731_residues MVRQPFSLKERDRARLVKDRVVRFAVTCGGVSVLGALVLIFIYLAMVVVPLFGDAKWRGDIAVKTVSTTDPLLMTIGAYG ENAFLMSNDGVGQFWSLRSVSDQPIQTQSLGFTPVLWAQTPPAQGWFALVGQDNQVAVVHPQLSHSMTTQGREFTPSLER LALPEAFRLSEQPLQQFAFALTAEALIFATYDNAQQIQILRLDRATQQEISRLSLSVPFSDLSQLLLTPDGKTLYLRTRS ELVVALLDKQSYQIREIVDLSEGDSRHQVTQLYLLSGAFSLLAVHEDGLVSQWFDVLRDGQRHLNHIRNFKLASEVQFLL PDTNTKGFYSFYRNGTLQSHYTTSEKLVLFERAYQRAPQLVAMSENQAYLASYDQGKIRLAQVENRNPEVSFSALWQKVW YESYPEPEFVWQSTAATDDFEAKFSLVPIAFGTLKAAAFAMLFAMPIAVLGAIYTAYFMTPSMRRVVKPTIELMEALPTV IIGFLAGLWFAPFVESHLPAVLALMILLPPSTIVLGFIWSRLPKAWLRRIPSGWHALILIPVLIGISALILSYSGELENA LFAGDLRVYLAQHGIGYDQRNALVVGFAMGFAVIPTIFTIAEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIF SAIMMGLGRAVGETMIVLMATGNTPLLDWNIFEGMRTLSATIAVELPESEVQSAHFRILFLAALLLLTFTFAVNSLAEWV RQRLREKYRSL
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4590
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=322, Percent_Identity=25.1552795031056, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 81479; Mature: 81479
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRQPFSLKERDRARLVKDRVVRFAVTCGGVSVLGALVLIFIYLAMVVVPLFGDAKWRGD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC IAVKTVSTTDPLLMTIGAYGENAFLMSNDGVGQFWSLRSVSDQPIQTQSLGFTPVLWAQT EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEEEECCC PPAQGWFALVGQDNQVAVVHPQLSHSMTTQGREFTPSLERLALPEAFRLSEQPLQQFAFA CCCCCEEEEEECCCEEEEECCCHHCHHCCCCCCCCCCHHHHCCCHHHCCCHHHHHHHHHH LTAEALIFATYDNAQQIQILRLDRATQQEISRLSLSVPFSDLSQLLLTPDGKTLYLRTRS HHHHEEEEEECCCCCEEEEEECCHHHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEEHH ELVVALLDKQSYQIREIVDLSEGDSRHQVTQLYLLSGAFSLLAVHEDGLVSQWFDVLRDG HHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH QRHLNHIRNFKLASEVQFLLPDTNTKGFYSFYRNGTLQSHYTTSEKLVLFERAYQRAPQL HHHHHHHHCCCHHHCEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCE VAMSENQAYLASYDQGKIRLAQVENRNPEVSFSALWQKVWYESYPEPEFVWQSTAATDDF EEECCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC EAKFSLVPIAFGTLKAAAFAMLFAMPIAVLGAIYTAYFMTPSMRRVVKPTIELMEALPTV CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IIGFLAGLWFAPFVESHLPAVLALMILLPPSTIVLGFIWSRLPKAWLRRIPSGWHALILI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH PVLIGISALILSYSGELENALFAGDLRVYLAQHGIGYDQRNALVVGFAMGFAVIPTIFTI HHHHHHHHHHHHCCCCCCCCEEHHHHHHEEHHCCCCCCCCCEEEEEHHHHHHHHHHHHHH AEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIFSAIMMGLGRAVGETMIVLMA HHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEE TGNTPLLDWNIFEGMRTLSATIAVELPESEVQSAHFRILFLAALLLLTFTFAVNSLAEWV CCCCCEEECHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRLREKYRSL HHHHHHHHHCC >Mature Secondary Structure MVRQPFSLKERDRARLVKDRVVRFAVTCGGVSVLGALVLIFIYLAMVVVPLFGDAKWRGD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC IAVKTVSTTDPLLMTIGAYGENAFLMSNDGVGQFWSLRSVSDQPIQTQSLGFTPVLWAQT EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCEEEECCC PPAQGWFALVGQDNQVAVVHPQLSHSMTTQGREFTPSLERLALPEAFRLSEQPLQQFAFA CCCCCEEEEEECCCEEEEECCCHHCHHCCCCCCCCCCHHHHCCCHHHCCCHHHHHHHHHH LTAEALIFATYDNAQQIQILRLDRATQQEISRLSLSVPFSDLSQLLLTPDGKTLYLRTRS HHHHEEEEEECCCCCEEEEEECCHHHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEEHH ELVVALLDKQSYQIREIVDLSEGDSRHQVTQLYLLSGAFSLLAVHEDGLVSQWFDVLRDG HHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH QRHLNHIRNFKLASEVQFLLPDTNTKGFYSFYRNGTLQSHYTTSEKLVLFERAYQRAPQL HHHHHHHHCCCHHHCEEEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCE VAMSENQAYLASYDQGKIRLAQVENRNPEVSFSALWQKVWYESYPEPEFVWQSTAATDDF EEECCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCC EAKFSLVPIAFGTLKAAAFAMLFAMPIAVLGAIYTAYFMTPSMRRVVKPTIELMEALPTV CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IIGFLAGLWFAPFVESHLPAVLALMILLPPSTIVLGFIWSRLPKAWLRRIPSGWHALILI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH PVLIGISALILSYSGELENALFAGDLRVYLAQHGIGYDQRNALVVGFAMGFAVIPTIFTI HHHHHHHHHHHHCCCCCCCCEEHHHHHHEEHHCCCCCCCCCEEEEEHHHHHHHHHHHHHH AEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIFSAIMMGLGRAVGETMIVLMA HHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEE TGNTPLLDWNIFEGMRTLSATIAVELPESEVQSAHFRILFLAALLLLTFTFAVNSLAEWV CCCCCEEECHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQRLREKYRSL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]