Click here to switch to the map view.

The map label for this gene is rluD

Identifier: 227080889

GI number:

Start: 715300

End: 716274

Strand: Direct

Name: rluD

Synonym: VCM66_0667

Alternate gene names: NA

Gene position: NA

Preceding gene: 227080887

Following gene: 227080890

Centisome position: NA

GC content: NA

Gene sequence:

>975_bases
ATGGCTCATCAGATTGAATTAACTCAAACAGTAAAAGATAGCCAGCTTGGTCAACGTCTTGATCAAGCTGTGGCTGAATT
ATTTACCGACTTTTCCCGCTCACGTTTAAAAGAGTGGTTGTTGGAAGGCAAGATTGCCGTGAATGGTGATGTCATCACCA
AACCGCGTACCAAAGTGATGGGTGGCGAGGTGATTACCGTTCAGGCAGAACTGGAAGACGAACAGCGCTGGGAAGCGCAG
GATTTGCCACTGAACATTGTGTATGAAGATGACGACATTATCGTTATTAACAAACCGCGTGACTTTGTGGTTCACCCCGG
TGCCGGTCAGGCGGATAAAACCGTGCTTAACGCATTGCTGTTCCATTATTCGCCGATTGCTGAAGTGCCACGTGCAGGCA
TCGTCCATCGTCTCGATAAAGATACGACGGGTTTGATGGTGGTCGCGAAAACGGTTCCCGCGCAAACACGCTTGGTACGT
GCACTACAAAAGCGCGACGTGACTCGTGAGTACGAAGCGATTGTGATTGGCACAATGACCGCGGGTGGCATGATTGATAA
GCCGATTGGCCGTCACTCGACCAAACGTACTTTAATGTCGGTCTCCCCGATGGGCAAACATGCCGTGACCCATTACCGTG
TGGCAGAGCATTTCCGTGAACATACGCGTTTGCGTCTACGTTTGGAAACGGGTCGTACCCACCAAATTCGTGTGCACATG
GCTTATTTGCAACACCCACTCTTGGGTGATACGGCCTATGGTGGTCGTGCACGCATTCCGAAAGGTGCGACGGAAGAACT
GACGGAAATGATTCGTGACTTCGATCGTCAAGCACTGCACGCGGTGATGTTGAAATTTGAGCATCCGGTTACGGGGGAAG
AGCTCGAATTCCATGCACCAGTGCCTGATGATATGGTTGAGATGACGCTTGCACTGCGTGAAGATGCGAAGCTAAACCGC
ACTGAAGAGTATTAA

Upstream 100 bases:

>100_bases
GCAAATCGTTTCGTTACTTTCTTGGCAGTAACAGATACAATGTCGGCGTATTTTTCCATACTAGTGACTATTAGTCTCAC
GGTTTTTTAAAAAGTTCGAT

Downstream 100 bases:

>100_bases
TCATGATTCTCCCCAACTGGAATGCACCCAAACAAGTCAAAGCGTTTAGTTCGACTCGCCACGGTGGTTTTTCGCAAGGC
GTTTATCAAGGGTTAAACCT

Product: 23S rRNA pseudouridine synthase D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>324_residues
MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVMGGEVITVQAELEDEQRWEAQ
DLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVR
ALQKRDVTREYEAIVIGTMTAGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM
AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVPDDMVEMTLALREDAKLNR
TEEY

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA