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The map label for this gene is yjjK [C]

Identifier: 227080879

GI number: 227080879

Start: 703804

End: 705471

Strand: Reverse

Name: yjjK [C]

Synonym: VCM66_0656

Alternate gene names: 227080879

Gene position: 705471-703804 (Counterclockwise)

Preceding gene: 227080882

Following gene: 227080878

Centisome position: 24.39

GC content: 50.66

Gene sequence:

>1668_bases
ATGGCTGAATACGTATATACCATGTCTCGGGTGAGCAAGATTGTGCCACCCAAGCGTCAAATTCTGAAAGATATCTCCTT
GAGTTTCTTCCCGGGTGCCAAAATTGGTGTTCTGGGCCTTAACGGTGCGGGTAAATCGACCCTGCTGCGTATCATGGCAG
GCATTGACAAAGACATCGACGGTGAAGCTCGTCCACAACCCGGTTTGAAAGTGGGTTATCTGCCCCAAGAGCCTAAGTTG
GATGAGAGTAAAACCGTACGTGAAGTTGTCGAAGAAGCCGTTGCGGATGTGGCTTACGCGCTTAAGCGTCTTGATGAAGT
TTATGCCGCGTACGCTGAGCCTGATGCAGACTTTGATGCTCTGGCTAAAGAACAGGGTGAACTGGAAGCGCTGATCCAAG
CGAAAAATGGCCACAACCTAGATAATGCTCTAGAGCGTGCCGCCGATGCACTGCGCCTACCGGAGTGGGATGCGCAGGTG
AAATACCTCTCTGGTGGTGAGCGTCGTCGTGTGGCGATCTGTCGTCTTCTGCTGGAAAATCCAGACATGCTGCTGCTCGA
CGAACCCACCAACCACTTGGATGCCGAATCAGTGGCTTGGCTGGAGCGTTTCTTGGTCGATTACGCAGGGACTGTGGTCG
CGATTACCCACGACCGTTACTTCCTCGATAACGCGGCAGGCTGGATTCTGGAACTTGACCGTGGTGAAGGTATTCCATGG
CAAGGTAACTACACTTCATGGCTAGAGCAAAAAGATGCTCGTCTGAAACAAGAAGCCTCTCAAGAAAAAGCGCGCCAAAA
AACCATTGAGAAAGAGCTGGAATGGGTTCGTCAGAATCCAAAAGGTCGTCAGGCTAAATCGAAAGCGCGTATGGCACGTT
TTGAAGAGCTGCAAAATACTGAGCACCAAAAACGTAACGAAACCAACGAGCTGTTCATCCCGCCTGGTGAGCGCCTAGGT
GACAAAGTGATTGAAGTGAAAAACCTCACCAAATCATTCGATGGTCGTGTTCTGATTGATGATCTTTCTTTCAGCATGCC
AAAAGGTGCGATTGTCGGCATCATCGGCCCGAACGGTGCCGGTAAATCAACCCTATTCAAGATGCTGAGTGGTGTAGAAA
AGCCGGATTCAGGCACGATCGAGCTGGGTGATACCGTGAAACTGGCCTCGGTAGATCAGTTCCGTGACAGCATGAACGAC
AAGCACACCGTATTCCAAGAGATTTCTGAAGGTGCGGATATCATTCGCATCAACAACTTCGAAATCCCTGCTCGTGCTTA
CTGTTCACGCTTTAACTTCAAAGGCGTTGATCAGCAAAAAGTGATTGGCGAGCTGTCTGGTGGTGAGCGTAACCGTGTCC
ACTTGGCCAAACTGCTTAAAGCGGGCGGCAACGTGCTGTTACTCGACGAACCTACCAACGATCTGGACGTCGAAACCCTG
CGTGCTCTGGAAGAAGCGCTACTAGAATTCCCGGGCTGTGCTATGGTGATCTCGCATGACCGTTGGTTCCTAGACCGTAT
TGCCACCCACATCCTAGATTACCGTGATGAAGGTAAAGTGAACTTCTACGAAGGTAACTACACCGAGTACATGGAGTGGC
TGAAGCAGACTCTGGGCGCACAAGCAGCAGAGCCTCACCGTATTAAGTACAAGCGCATTACCAAGTAA

Upstream 100 bases:

>100_bases
TTTTACACAGGCTGAAATGCGGGTGCTCTAGTAACAAAAAGTCTTGCTTTGGTATAGAATGGCGACTTTATTCCGTTTGA
AAGATTAGGAACGATCGGCA

Downstream 100 bases:

>100_bases
AATACTGTCGGGTATCACACTCAGAAAAGGTCGCCATGCGGCCTTTTCTTTTGCTCCACAGAAACCGAGTTTGTGATTGA
GTAAGCTTATTTCAGCATAC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKL
DESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQV
KYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPW
QGNYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEHQKRNETNELFIPPGERLG
DKVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMND
KHTVFQEISEGADIIRINNFEIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETL
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGAQAAEPHRIKYKRITK

Sequences:

>Translated_555_residues
MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKL
DESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQV
KYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPW
QGNYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEHQKRNETNELFIPPGERLG
DKVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMND
KHTVFQEISEGADIIRINNFEIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETL
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGAQAAEPHRIKYKRITK
>Mature_554_residues
AEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKLD
ESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQVK
YLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPWQ
GNYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEHQKRNETNELFIPPGERLGD
KVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMNDK
HTVFQEISEGADIIRINNFEIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLR
ALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGAQAAEPHRIKYKRITK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=545, Percent_Identity=29.7247706422018, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI27881506, Length=545, Percent_Identity=29.7247706422018, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=28.2485875706215, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=27.1897810218978, Blast_Score=149, Evalue=9e-36,
Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=27.1897810218978, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI171184400, Length=245, Percent_Identity=28.1632653061224, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI116734710, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI31657092, Length=202, Percent_Identity=28.2178217821782, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=79.4594594594595, Blast_Score=920, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=34.4961240310078, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1789751, Length=526, Percent_Identity=31.9391634980989, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=30.8712121212121, Blast_Score=221, Evalue=9e-59,
Organism=Escherichia coli, GI87081782, Length=576, Percent_Identity=25.3472222222222, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI48994943, Length=474, Percent_Identity=26.5822784810127, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87081791, Length=164, Percent_Identity=35.9756097560976, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=29.0155440414508, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=29.3333333333333, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790739, Length=172, Percent_Identity=34.8837209302326, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1788761, Length=199, Percent_Identity=30.6532663316583, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788897, Length=209, Percent_Identity=29.1866028708134, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=30.3191489361702, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786975, Length=215, Percent_Identity=26.5116279069767, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=27.8538812785388, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=25.7894736842105, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789593, Length=166, Percent_Identity=31.3253012048193, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787370, Length=207, Percent_Identity=25.6038647342995, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787089, Length=219, Percent_Identity=25.5707762557078, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=26.4423076923077, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI48995001, Length=238, Percent_Identity=25.6302521008403, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=26.8181818181818, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=226, Percent_Identity=27.4336283185841, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789891, Length=232, Percent_Identity=24.5689655172414, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1790190, Length=521, Percent_Identity=22.0729366602687, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787143, Length=198, Percent_Identity=28.2828282828283, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789962, Length=229, Percent_Identity=27.0742358078603, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787164, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=210, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787105, Length=201, Percent_Identity=27.363184079602, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788472, Length=227, Percent_Identity=24.6696035242291, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=26, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=26.8022181146026, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17553372, Length=527, Percent_Identity=29.7912713472486, Blast_Score=165, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI193211015, Length=192, Percent_Identity=30.2083333333333, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=192, Percent_Identity=30.2083333333333, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=192, Percent_Identity=29.6875, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17542146, Length=269, Percent_Identity=25.6505576208178, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=26.8738574040219, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6320874, Length=511, Percent_Identity=27.9843444227006, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6323278, Length=377, Percent_Identity=26.2599469496021, Blast_Score=117, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=387, Percent_Identity=25.5813953488372, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=388, Percent_Identity=27.0618556701031, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=385, Percent_Identity=23.6363636363636, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24642252, Length=550, Percent_Identity=28.9090909090909, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI18859989, Length=550, Percent_Identity=28.9090909090909, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24666836, Length=503, Percent_Identity=29.8210735586481, Blast_Score=189, Evalue=6e-48,
Organism=Drosophila melanogaster, GI24641342, Length=536, Percent_Identity=29.2910447761194, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24648314, Length=165, Percent_Identity=32.1212121212121, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641565, Length=269, Percent_Identity=27.5092936802974, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62487; Mature: 62356

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDID
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCC
GEARPQPGLKVGYLPQEPKLDESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDA
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAKEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLEN
HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEEEEECCCCCCC
QGNYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EHQKRNETNELFIPPGERLGDKVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGA
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNF
CHHHHHHHHHCCCCCCCCCEEECCEEEEHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCC
EIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETL
CCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGA
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCC
QAAEPHRIKYKRITK
CCCCCCCCCHHCCCC
>Mature Secondary Structure 
AEYVYTMSRVSKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDID
CHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCC
GEARPQPGLKVGYLPQEPKLDESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDA
CCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAKEQGELEALIQAKNGHNLDNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLEN
HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEEEEECCCCCCC
QGNYTSWLEQKDARLKQEASQEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EHQKRNETNELFIPPGERLGDKVIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGA
HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFKMLSGVEKPDSGTIELGDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNF
CHHHHHHHHHCCCCCCCCCEEECCEEEEHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCC
EIPARAYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETL
CCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQTLGA
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCC
QAAEPHRIKYKRITK
CCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]