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The map label for this gene is yehU [H]

Identifier: 227080875

GI number: 227080875

Start: 699064

End: 700740

Strand: Reverse

Name: yehU [H]

Synonym: VCM66_0652

Alternate gene names: 227080875

Gene position: 700740-699064 (Counterclockwise)

Preceding gene: 227080878

Following gene: 227080874

Centisome position: 24.23

GC content: 49.31

Gene sequence:

>1677_bases
ATGGATCTCATCCTCTCATTACTGCAACAGATGTGTGTTTACCTTGTTCTCGCCTATATGTTGAGTAAAACGCCGATCTT
CATTCCTTTGCTGAACATTTCTGGTCGGTTTGACCACAAAATCAGTGTTTATGTTCTGTTTTCGCTGTTTTGCATTATGG
GCACCTACTTTGGCCTGCAGATCAATGATGCGATTGCCAATACGCGTGCCATCGGCGCTGTGATGGGGGGTCTGTTGGGT
GGACCTGTGATTGGTTTTGCGGTGGGCCTCACCGGAGGCTTACACCGCTATACCTTAGGGGGATTTACCGATCTCGCCTG
CGCGATTTCCACCACCGCTGAAGGTTTAATTGGCGGCTTGCTACACACCTATTTGCTGCGCAAAGGCAAAGGGAAGTTAC
TGTTTAGCCCAAGTATTGTCTTTGCGGTCACCTTATTTGCCGAAATTGTGCAGATGCTGATCATCTTGGTCGTGGCGAAA
CCGTTTGAACAGTCTTACGCGCTGGTTTCCACCATCGCCGCGCCGATGATCATTGCTAACTCAGTCGGTGCCGCACTGTT
TATGAGCATCTTGCTCGATCGCAAAACCATTTTTGAAGAGTATTCCGCGACGTTTTCACGCCGCGCTCTGAATATTGCCG
AGCGTTCTGTTGGTATCCTTGCTGCCGGTTTTAACCCAGAAAACGCCAACAAAATTGCCCGAATCGTGTATGAACAGACC
AATGTCGGCGCGGTCTCGATCACCGATCGCGAAAAAATCCTCGCCTTTGTCGGGATTGGCGATGATCACCATAAACCGAA
TACACCGATCAGCTCGCAAAGCACGCTCGATGCGATTAATCGCAACGCCATCATCTATCTCGATGGCAAAGAACATCCTT
ATCAATGTTCTTTGTCTCCGACCTGCAAACTGGGGTCTGCGTTAATCATTCCGTTGCGAGCTGGCGATCGAGTGATCGGC
ACCATCAAGCTCTACGAGCCAAAACGTAAGCTGTTTTCCACCATCAATATGTCAATGGCACAGGGCATCGCCCAACTGCT
ATCCAGCCAAATTTTGTATGGCGAATATCAGCAAAAACAAATCCTGCTCTCGCGAGCGGAAATCAAACTCCTGCAAGCGC
AGGTCAATCCGCATTTTTTGTTTAACGCACTCAATACCATCAGTGCGGTGATCCGCCGTGAGCCAGATAAAGCTCGCGAG
CTGATTTTGCATCTGTCGCAATTTTTCCGCAGCAACCTCAAACAGAACGTCGAAACCGTCACTTTGCGTGAAGAGCTTGC
CCACGTGAACGCTTACCTCACTATTGAAAAAGCGCGCTTTAGTGACAGGCTCGATGTGGAAATTGCGATTGATGATGCCC
TGCTAGAACGCAATGTCCCGAGCTTCACTTTGCAGCCTTTGGTGGAAAATGCCATCAAACACGGCACCTCTAACCTACTC
GAAGCTGGCAAAGTGCGCATTTACAGTGAAGTGGTTGAAGGGGGAATGCGCGTCGTGGTGGAAGACAACGCCGGGCTCTA
TCAGCCTCCGAGTGAAGATTATGATGGTTTAGGGATGCAAATTGTTGAAAAGCGCCTCACCAACAAATTTGGTCTTAAGT
CAGGGCTACAGATTGAGGTCGCGCCACAAGAGTACACGCGAATGAGCTTTGTCATTCCACAGCAAGGCACTTACTAA

Upstream 100 bases:

>100_bases
TTTAATGACACTTGGCACACAAACTGGGGAATAAAGCGTGTTTTGTTCGCTTTGAGTATCTTAAAATAAGCCGTTTTTCC
GCTCAGACGATGGACAGGTT

Downstream 100 bases:

>100_bases
GGGATTAACATGTTATCTGCACTACTCATTGACGATGAACGCTTTGCCCGTGAAGAGCTCGCGGAACTCTTAGCGGAAAG
TGGCCAGATTGAGGTCATCG

Product: GAF/HisKin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQINDAIANTRAIGAVMGGLLG
GPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLLHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAK
PFEQSYALVSTIAAPMIIANSVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT
NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSPTCKLGSALIIPLRAGDRVIG
TIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARE
LILHLSQFFRSNLKQNVETVTLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL
EAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEVAPQEYTRMSFVIPQQGTY

Sequences:

>Translated_558_residues
MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQINDAIANTRAIGAVMGGLLG
GPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLLHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAK
PFEQSYALVSTIAAPMIIANSVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT
NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSPTCKLGSALIIPLRAGDRVIG
TIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARE
LILHLSQFFRSNLKQNVETVTLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL
EAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEVAPQEYTRMSFVIPQQGTY
>Mature_558_residues
MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQINDAIANTRAIGAVMGGLLG
GPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGLLHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAK
PFEQSYALVSTIAAPMIIANSVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT
NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSPTCKLGSALIIPLRAGDRVIG
TIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARE
LILHLSQFFRSNLKQNVETVTLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL
EAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEVAPQEYTRMSFVIPQQGTY

Specific function: Unknown

COG id: COG3275

COG function: function code T; Putative regulator of cell autolysis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788446, Length=555, Percent_Identity=57.8378378378378, Blast_Score=637, Evalue=0.0,
Organism=Escherichia coli, GI1788723, Length=571, Percent_Identity=29.5971978984238, Blast_Score=243, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR010559
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 61438; Mature: 61438

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQ
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEE
INDAIANTRAIGAVMGGLLGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGL
ECHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
LHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIAN
HHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHEECC
NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSP
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEECCCC
TCKLGSALIIPLRAGDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQ
CCCCCCEEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
ILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVETV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH
TLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL
HHHHHHHHHHEEEEEEECCCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
EAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEV
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
APQEYTRMSFVIPQQGTY
CCHHHCEEEEEECCCCCC
>Mature Secondary Structure
MDLILSLLQQMCVYLVLAYMLSKTPIFIPLLNISGRFDHKISVYVLFSLFCIMGTYFGLQ
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEE
INDAIANTRAIGAVMGGLLGGPVIGFAVGLTGGLHRYTLGGFTDLACAISTTAEGLIGGL
ECHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH
LHTYLLRKGKGKLLFSPSIVFAVTLFAEIVQMLIILVVAKPFEQSYALVSTIAAPMIIAN
HHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SVGAALFMSILLDRKTIFEEYSATFSRRALNIAERSVGILAAGFNPENANKIARIVYEQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHEECC
NVGAVSITDREKILAFVGIGDDHHKPNTPISSQSTLDAINRNAIIYLDGKEHPYQCSLSP
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCEEECCCC
TCKLGSALIIPLRAGDRVIGTIKLYEPKRKLFSTINMSMAQGIAQLLSSQILYGEYQQKQ
CCCCCCEEEEEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
ILLSRAEIKLLQAQVNPHFLFNALNTISAVIRREPDKARELILHLSQFFRSNLKQNVETV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH
TLREELAHVNAYLTIEKARFSDRLDVEIAIDDALLERNVPSFTLQPLVENAIKHGTSNLL
HHHHHHHHHHEEEEEEECCCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
EAGKVRIYSEVVEGGMRVVVEDNAGLYQPPSEDYDGLGMQIVEKRLTNKFGLKSGLQIEV
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
APQEYTRMSFVIPQQGTY
CCHHHCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]