| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is lgt
Identifier: 227080855
GI number: 227080855
Start: 678191
End: 679006
Strand: Direct
Name: lgt
Synonym: VCM66_0632
Alternate gene names: 227080855
Gene position: 678191-679006 (Clockwise)
Preceding gene: 227080854
Following gene: 227080856
Centisome position: 23.45
GC content: 48.9
Gene sequence:
>816_bases ATGCCTCAGGGTTATCTGCAGTTTCCCAATATTGACCCCGTATTGTTTTCGATCGGCCCTCTAGCGGTGCGCTGGTATGG CTTGATGTATTTGGTGGGTTTCCTTTTTGCTATGTGGTTGGCCAATCGCCGAGCGGATCGCGCGGGCAGTGGTTGGACGC GTGAGCAAGTCTCTGACTTGTTATTCGCCGGCTTTTTAGGTGTAGTGATCGGTGGCCGAGTTGGTTATGTGATCTTCTAC AATTTTGATCTGTTCCTTGCTGACCCTCTTTATTTATTCAAAGTGTGGACTGGCGGTATGTCCTTCCACGGCGGCTTATT GGGTGTGATCACCGCCATGTTCTGGTATGCGCGTAAAAACCAACGCACCTTCTTTGGTGTGGCCGATTTTGTTGCCCCCT TGGTGCCATTCGGTTTGGGGATGGGACGTATCGGTAACTTTATGAATAGTGAACTTTGGGGACGAGTAACGGATGTGCCT TGGGCTTTTGTATTCCCTAATGGTGGCCCACTGCCGCGCCATCCTTCACAGCTTTATGAATTCGCCTTAGAAGGCGTGGT TCTATTCTTTATTCTTAATTGGTTTATTGGTAAACCTCGTCCGCTAGGCAGCGTATCCGGACTGTTTTTAGCTGGATACG GTACATTCCGCTTCCTTGTGGAATACGTCCGTGAGCCAGATGCTCAGTTGGGGCTGTTTGGTGGTTTCATTTCAATGGGG CAAATCCTCTCCTTACCTATGGTGATCATCGGTATTTTGATGATGGTTTGGTCTTACAAGCGCGGTTTGTATCAAGACCG TGTAGCAGCAAAATAG
Upstream 100 bases:
>100_bases CCAACAGCAAGGCTTAAGCGATTCTTTGCCATTTTTTTAATGTGCGTCGCTGTGACCATGTTGTTCCAGTAATACTCATT GTTTATAGAGAAGGTTTGTT
Downstream 100 bases:
>100_bases GGTAGTTAGGTGAGACAGTATTTAGATCTTTGTCAGCGCATCGTCGATCAAGGTGTTTGGGTTGAAAATGAACGAACGGG CAAGCGTTGTTTGACTGTGA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MPQGYLQFPNIDPVLFSIGPLAVRWYGLMYLVGFLFAMWLANRRADRAGSGWTREQVSDLLFAGFLGVVIGGRVGYVIFY NFDLFLADPLYLFKVWTGGMSFHGGLLGVITAMFWYARKNQRTFFGVADFVAPLVPFGLGMGRIGNFMNSELWGRVTDVP WAFVFPNGGPLPRHPSQLYEFALEGVVLFFILNWFIGKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG QILSLPMVIIGILMMVWSYKRGLYQDRVAAK
Sequences:
>Translated_271_residues MPQGYLQFPNIDPVLFSIGPLAVRWYGLMYLVGFLFAMWLANRRADRAGSGWTREQVSDLLFAGFLGVVIGGRVGYVIFY NFDLFLADPLYLFKVWTGGMSFHGGLLGVITAMFWYARKNQRTFFGVADFVAPLVPFGLGMGRIGNFMNSELWGRVTDVP WAFVFPNGGPLPRHPSQLYEFALEGVVLFFILNWFIGKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG QILSLPMVIIGILMMVWSYKRGLYQDRVAAK >Mature_270_residues PQGYLQFPNIDPVLFSIGPLAVRWYGLMYLVGFLFAMWLANRRADRAGSGWTREQVSDLLFAGFLGVVIGGRVGYVIFYN FDLFLADPLYLFKVWTGGMSFHGGLLGVITAMFWYARKNQRTFFGVADFVAPLVPFGLGMGRIGNFMNSELWGRVTDVPW AFVFPNGGPLPRHPSQLYEFALEGVVLFFILNWFIGKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMGQ ILSLPMVIIGILMMVWSYKRGLYQDRVAAK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=289, Percent_Identity=60.8996539792388, Blast_Score=353, Evalue=4e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_VIBC3 (A5F8Y5)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - STRING: A5F8Y5 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0206 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: NPIAFSL - ProtClustDB: PRK00052 - BioCyc: VCHO345073:VC0395_A0206-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30457; Mature: 30326
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x25872ba8)-; HASH(0x252f1a28)-; HASH(0x244570dc)-; HASH(0x25634458)-; HASH(0x257ff7b8)-; HASH(0x2592fc7c)-; HASH(0x24a18578)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQGYLQFPNIDPVLFSIGPLAVRWYGLMYLVGFLFAMWLANRRADRAGSGWTREQVSDL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVIGGRVGYVIFYNFDLFLADPLYLFKVWTGGMSFHGGLLGVITAMFWYARKN HHHHHHHHHHCCCEEEEEEEECCHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC QRTFFGVADFVAPLVPFGLGMGRIGNFMNSELWGRVTDVPWAFVFPNGGPLPRHPSQLYE CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCEEEECCCCCCCCCCHHHHHH FALEGVVLFFILNWFIGKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QILSLPMVIIGILMMVWSYKRGLYQDRVAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure PQGYLQFPNIDPVLFSIGPLAVRWYGLMYLVGFLFAMWLANRRADRAGSGWTREQVSDL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH LFAGFLGVVIGGRVGYVIFYNFDLFLADPLYLFKVWTGGMSFHGGLLGVITAMFWYARKN HHHHHHHHHHCCCEEEEEEEECCHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC QRTFFGVADFVAPLVPFGLGMGRIGNFMNSELWGRVTDVPWAFVFPNGGPLPRHPSQLYE CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCEEEECCCCCCCCCCHHHHHH FALEGVVLFFILNWFIGKPRPLGSVSGLFLAGYGTFRFLVEYVREPDAQLGLFGGFISMG HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QILSLPMVIIGILMMVWSYKRGLYQDRVAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA