Click here to switch to the map view.

The map label for this gene is 227080854

Identifier: 227080854

GI number: 227080854

Start: 677368

End: 678162

Strand: Direct

Name: 227080854

Synonym: VCM66_0631

Alternate gene names: NA

Gene position: 677368-678162 (Clockwise)

Preceding gene: 227080853

Following gene: 227080855

Centisome position: 23.42

GC content: 47.04

Gene sequence:

>795_bases
GTGAATATTGAACTCTTAGCTATACTGCTGCTGTTAGGGGCAGTGGTGGGTGTGCTTGCTGGCTTATTGGGCATTGGTGG
CGGCTTACTGGTGGTCCCCGCTCTACTGTTTTTACTGCCTTATGCTGGCATCTCGACCGAGATTGTGATGCAGCTTGCGC
TGGCCACATCGTTAGCGACGATCATACTCACATCAGGCTCATCGGCACTAAACCATCTAAAGCTGGGTAATGTCGATGTT
TTTGTCGTGAAATGGTTAATGCCGGGTGTGGTGGTCGGTGGGTTTTTAGGCTCAGTGGTTGCAGAATGGATCCCAAGCCA
ATATTTACCCAAAGTGTTCGGGGTCATTGTGCTCTGTTTGAGTGTGCAGATGTACCGTTCGATACGTGCATTACAAAATC
ATCCAATGCCAAGTGCATGGATTACCACCTTGTGCGGTACCGGAATTGGGGTGATCTCAAGTTTGGCCGGTATTGGCGGC
GGTTCTTTATCGGTGCCTTTTTTGAATCGACATGGCATTGAAATGAAAAAGGCGATAGGTTCTTCATCGGTCTGTGGTTT
TGCGATTGCGATATCGGGCATGATTGGTTTTATTTTGCACGGTTATCAAGTGGAGAACTTACCACAATACAGCCTTGGTT
ATGTTTATTTACCTGCATTGTTAGCGATTGCTACAACATCGATGCTTACCACGCGAATTGGCGCTAAACTTGCCACCCAA
ATGCCAACAGCAAGGCTTAAGCGATTCTTTGCCATTTTTTTAATGTGCGTCGCTGTGACCATGTTGTTCCAGTAA

Upstream 100 bases:

>100_bases
CCAACCTTATGGACGAGAAATCTACAATATGATGCTCGCCTATATCGAAAAACACGGTTTTGCAGGTTTTGTCCGTGCAG
GCAAAAAATAGGAACCAAAT

Downstream 100 bases:

>100_bases
TACTCATTGTTTATAGAGAAGGTTTGTTATGCCTCAGGGTTATCTGCAGTTTCCCAATATTGACCCCGTATTGTTTTCGA
TCGGCCCTCTAGCGGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDV
FVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGG
GSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ
MPTARLKRFFAIFLMCVAVTMLFQ

Sequences:

>Translated_264_residues
MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDV
FVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGG
GSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ
MPTARLKRFFAIFLMCVAVTMLFQ
>Mature_264_residues
MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLATIILTSGSSALNHLKLGNVDV
FVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCLSVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGG
GSLSVPFLNRHGIEMKKAIGSSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ
MPTARLKRFFAIFLMCVAVTMLFQ

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27736; Mature: 27736

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLAT
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IILTSGSSALNHLKLGNVDVFVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCL
HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGSLSVPFLNRHGIEMKKAIG
HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC
SSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ
CCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPTARLKRFFAIFLMCVAVTMLFQ
CCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIELLAILLLLGAVVGVLAGLLGIGGGLLVVPALLFLLPYAGISTEIVMQLALATSLAT
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IILTSGSSALNHLKLGNVDVFVVKWLMPGVVVGGFLGSVVAEWIPSQYLPKVFGVIVLCL
HHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SVQMYRSIRALQNHPMPSAWITTLCGTGIGVISSLAGIGGGSLSVPFLNRHGIEMKKAIG
HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCC
SSSVCGFAIAISGMIGFILHGYQVENLPQYSLGYVYLPALLAIATTSMLTTRIGAKLATQ
CCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPTARLKRFFAIFLMCVAVTMLFQ
CCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]