| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080850
Identifier: 227080850
GI number: 227080850
Start: 674347
End: 674439
Strand: Reverse
Name: 227080850
Synonym: VCM66_0627
Alternate gene names: NA
Gene position: 674439-674347 (Counterclockwise)
Preceding gene: 227080857
Following gene: 227080849
Centisome position: 23.32
GC content: 38.71
Gene sequence:
>93_bases ATGAGACATACCGCGCATTTATTCACGTTTTCTGTGAATAACCGTGTGAAGAAACTTGGGGGCTGTGTAAAAAAAGGCAT TTATCAACAATGA
Upstream 100 bases:
>100_bases CAAGCGGAGCAAACTTACTATTGTGATTAGCCCGATATTTATTAGTAAATGGGATAAAAAAGGATAAGTTCTGTGCCAGT TCTAAGTTATCAACAATTTT
Downstream 100 bases:
>100_bases CCAATCTAACAACCAGAAAGAAAAACAACAAAAAATAACTGAAAAACAAAAGGTTAAATCAAATCATTCCATAATCAGAA ACTTAACCTACCAGACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 30
Protein sequence:
>30_residues MRHTAHLFTFSVNNRVKKLGGCVKKGIYQQ
Sequences:
>Translated_30_residues MRHTAHLFTFSVNNRVKKLGGCVKKGIYQQ >Mature_30_residues MRHTAHLFTFSVNNRVKKLGGCVKKGIYQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3462; Mature: 3462
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTAHLFTFSVNNRVKKLGGCVKKGIYQQ CCCCCEEEEEECCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRHTAHLFTFSVNNRVKKLGGCVKKGIYQQ CCCCCEEEEEECCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA