Click here to switch to the map view.

The map label for this gene is yhbV [H]

Identifier: 227080832

GI number: 227080832

Start: 652792

End: 653757

Strand: Reverse

Name: yhbV [H]

Synonym: VCM66_0609

Alternate gene names: 227080832

Gene position: 653757-652792 (Counterclockwise)

Preceding gene: 227080833

Following gene: 227080816

Centisome position: 22.6

GC content: 48.45

Gene sequence:

>966_bases
ATGGAATGCGGCACTGGCCAATGTCTCAGAAGGTACCCAAACCACACTTGGTGCCTATCACCGTCAATGGCAATAAGGGC
AACGATCATGAAATATGCTTTAGGTCCACTACTCTATTTCTGGCCAAAACAGGACGTTGAAAGTTTCTATACTCAAGCCG
CCGCCAGCATGGCGGATGTCATTTATCTTGGTGAAACCGTCTGCTCGAAGCGCCGTGAAATGAAACCACAACACTGGTTT
GAGATTGCCAAATCCCTCTCTGCTGCTGGCAAACAAGTGGTGCTTTCTACTATGGCACTGCTTGAAGCGCCAAGTGAAAT
CAATGTGATGAAGAAGTACATCGATAACGGTGACTTCGCGATTGAAGCCAATGATGTTTCCGCTATTCAGATGGCGCACG
AAAAAGGCCTTCCTTTTATCGTCGGGCCGGCCGTCAATACCTATAACGCACACACTCTCAAGCTGTTTTTAAAACAAGGC
ATGATCCGTTGGTGTATGCCAGTTGAGCTGTCACGAGACTGGCTAATCAACACCTTACAACAGTGTGATGAGCTCAATAT
TCGCGGACAATTTGAAGTAGAAGTGTTTAGCCACGGCTATTTACCGCTGGCTTATTCGGCGCGCTGCTTTACCGCTCGCG
CCGAAAACCGCGCTAAAGACGAATGTGAGACCTGCTGTATTCGCTACCCGACGGGCATTCAAGTCGCGAGCCAAGAGGGG
CAATCGGTATTTAATCTCAATGGTATTCAAACCCAGTCGGGTTACTGCTACAACTTGGTCAACGATTTACCAAGTATGGC
CGGATTGGTCGATGTGGTGCGTTTAAGCCCACTCGGCGTTGAGACGTTCCAACATCTTGAGCAATTCAAAGCCAATGAAC
AAGGGCTGAAGCCGCAGCCGATTACCAGCCATCAGTGCAACGGTTACTGGCATCAATTAGCTGGTTTGGCCGTTAAAAAT
AGCTAA

Upstream 100 bases:

>100_bases
GTCAACGAAGCCCTGCGTATGTCGAACAAGTCACCCGCACTTGGCGTGCCGCGATTGATCGCTACTTAGCCAATCCTGCG
CAATACCATGTCGAACCCAA

Downstream 100 bases:

>100_bases
GGTTTACCAAAGGGTTGCTCATCAGCAACCCTTTTTATTTGCCTTTTCCTTTTCATGCATAGGAAACTTGGGTAGGTTTC
CCCATTTTGTTCACATCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MECGTGQCLRRYPNHTWCLSPSMAIRATIMKYALGPLLYFWPKQDVESFYTQAAASMADVIYLGETVCSKRREMKPQHWF
EIAKSLSAAGKQVVLSTMALLEAPSEINVMKKYIDNGDFAIEANDVSAIQMAHEKGLPFIVGPAVNTYNAHTLKLFLKQG
MIRWCMPVELSRDWLINTLQQCDELNIRGQFEVEVFSHGYLPLAYSARCFTARAENRAKDECETCCIRYPTGIQVASQEG
QSVFNLNGIQTQSGYCYNLVNDLPSMAGLVDVVRLSPLGVETFQHLEQFKANEQGLKPQPITSHQCNGYWHQLAGLAVKN
S

Sequences:

>Translated_321_residues
MECGTGQCLRRYPNHTWCLSPSMAIRATIMKYALGPLLYFWPKQDVESFYTQAAASMADVIYLGETVCSKRREMKPQHWF
EIAKSLSAAGKQVVLSTMALLEAPSEINVMKKYIDNGDFAIEANDVSAIQMAHEKGLPFIVGPAVNTYNAHTLKLFLKQG
MIRWCMPVELSRDWLINTLQQCDELNIRGQFEVEVFSHGYLPLAYSARCFTARAENRAKDECETCCIRYPTGIQVASQEG
QSVFNLNGIQTQSGYCYNLVNDLPSMAGLVDVVRLSPLGVETFQHLEQFKANEQGLKPQPITSHQCNGYWHQLAGLAVKN
S
>Mature_321_residues
MECGTGQCLRRYPNHTWCLSPSMAIRATIMKYALGPLLYFWPKQDVESFYTQAAASMADVIYLGETVCSKRREMKPQHWF
EIAKSLSAAGKQVVLSTMALLEAPSEINVMKKYIDNGDFAIEANDVSAIQMAHEKGLPFIVGPAVNTYNAHTLKLFLKQG
MIRWCMPVELSRDWLINTLQQCDELNIRGQFEVEVFSHGYLPLAYSARCFTARAENRAKDECETCCIRYPTGIQVASQEG
QSVFNLNGIQTQSGYCYNLVNDLPSMAGLVDVVRLSPLGVETFQHLEQFKANEQGLKPQPITSHQCNGYWHQLAGLAVKN
S

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=291, Percent_Identity=64.9484536082474, Blast_Score=410, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 36038; Mature: 36038

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECGTGQCLRRYPNHTWCLSPSMAIRATIMKYALGPLLYFWPKQDVESFYTQAAASMADV
CCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHH
IYLGETVCSKRREMKPQHWFEIAKSLSAAGKQVVLSTMALLEAPSEINVMKKYIDNGDFA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
IEANDVSAIQMAHEKGLPFIVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSRDWLINTLQ
EECCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCHHHHCCCHHCCHHHHHHHHH
QCDELNIRGQFEVEVFSHGYLPLAYSARCFTARAENRAKDECETCCIRYPTGIQVASQEG
HHHCCCCCCEEEEEEECCCCEEEEECCHHEEHHHHCCCHHHHHHEEEECCCCCEEECCCC
QSVFNLNGIQTQSGYCYNLVNDLPSMAGLVDVVRLSPLGVETFQHLEQFKANEQGLKPQP
CEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
ITSHQCNGYWHQLAGLAVKNS
CCCCCCCCHHHHHHCEEECCC
>Mature Secondary Structure
MECGTGQCLRRYPNHTWCLSPSMAIRATIMKYALGPLLYFWPKQDVESFYTQAAASMADV
CCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHH
IYLGETVCSKRREMKPQHWFEIAKSLSAAGKQVVLSTMALLEAPSEINVMKKYIDNGDFA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEE
IEANDVSAIQMAHEKGLPFIVGPAVNTYNAHTLKLFLKQGMIRWCMPVELSRDWLINTLQ
EECCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCHHHHCCCHHCCHHHHHHHHH
QCDELNIRGQFEVEVFSHGYLPLAYSARCFTARAENRAKDECETCCIRYPTGIQVASQEG
HHHCCCCCCEEEEEEECCCCEEEEECCHHEEHHHHCCCHHHHHHEEEECCCCCEEECCCC
QSVFNLNGIQTQSGYCYNLVNDLPSMAGLVDVVRLSPLGVETFQHLEQFKANEQGLKPQP
CEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
ITSHQCNGYWHQLAGLAVKNS
CCCCCCCCHHHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]