| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is glmM [H]
Identifier: 227080820
GI number: 227080820
Start: 638436
End: 639776
Strand: Direct
Name: glmM [H]
Synonym: VCM66_0597
Alternate gene names: 227080820
Gene position: 638436-639776 (Clockwise)
Preceding gene: 227080819
Following gene: 227080821
Centisome position: 22.07
GC content: 47.8
Gene sequence:
>1341_bases ATGTCTGATAAGAGACGTTATTTTGGCACTGATGGGGTTCGTGGCAAAGTTGGCCAGTACCCAATTACTCCTGATTTTGT ACTTAAGCTTGGCTGGGCGGCTGGACGTGTACTGGCAAAACAAGGCACGAGAAAAGTCATTATTGGTAAAGATACCCGTA TTTCTGGCTATATGTTGGAGTCTGCACTGGAAGCTGGGCTTGCAGCGGCAGGATTAAAAGCGACCTTCACCGGACCAATG CCAACGCCAGCTGTGGCCTATCTTACCCAAACGTTTCGTGCAGAAGCGGGGATTGTTATTTCTGCATCGCACAACCCTTA CTACGATAACGGCATTAAGTTCTTCTCTTATGAAGGAACCAAACTGCCGGATGACATTGAGTTAGCGATTGAAGCTGAGT TAGATAAAGACATTGAATGTGTTGAATCGGCTGAGCTTGGTAAAGCTTCACGCATGGTGGATGCGGCGGGGCGTTACATC GAATTTTGTAAAAGCACTTTCCCTTCAAAACTCAGTCTATCTGGTTTGAAGCTTGTTGTGGATTGTGCCAATGGTGCCAC ATACCACATTGCGCCCAATGTTTTCCGTGAGTTGGGAGCGGAAGTCATTGCGATGGGCGTTGAGCCTAATGGTTTGAATA TCAATGACCAAGTCGGTGCAACCGACGTTCGCGCACTGCAAAAACGCGTTGTTGAAGAGCATGCTCATCTTGGCCTTGCT TTCGATGGTGACGGCGACCGCATCATCATGGTTGATCACCTAGGTAATAAAGTCGATGGTGACCAAATCGCTTACATTAT TGCCCGTGATGCACTGCGCCGTGGCGAGCTCAAAGGTGGCGTTGTTGGGACATTGATGACGAACCTTGGCATGGAGAATG GACTTAAACAGTTGGGCATTCCATTTGTACGCGCTGCGGTCGGTGATCGCTATGTTATGGAAAAACTTCTAGAGAAAGGC TGGAAGATTGGTGCGGAAAATTCAGGTCACGTCATCTTACTCGATAAAGTGACTACGGGGGATGCGATTGTCGCTGGCCT ACAAGTGCTGGCTTCAGTAGTGGGTAGTGAAATGACCCTGCATGAATTAGCGAAAGGTATGACGCTTTACCCACAAGTGT TGGAGAATGTCCGTTTTGCAGGAGATAACAATCCACTTGAAGCGGATGCGGTGAAAGCGGCGGTATCTGAGGTTGAAGCT GAGCTAGGTTCGAAAGGCCGTGTATTACTGCGCAAATCGGGTACAGAACCTCTGATCCGTGTGATGGTGGAAGGGGAAGA TGAAACCTTAGTGAAGCAATCTGCATTAAAAATTGCTCAAGCTGTAAAAGATAACTGCTAA
Upstream 100 bases:
>100_bases ATTATCCGTGTTCATGATGTAGAGCAGACCATTGATGCACTCAAAATGGTGCAGATGATGCATAACAATTTGTAAAAACA ATAATGTAAAGGAAACACAA
Downstream 100 bases:
>100_bases TTTGGGCGCTGGTTTCTACAATTCCTAGCTGATTGATTTCGCGCTAGGAATTGTAGAAATGCTCGAAAAAACGCTGTTGT GCGAGTTTTTTGAGCGATCA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLESALEAGLAAAGLKATFTGPM PTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGTKLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYI EFCKSTFPSKLSLSGLKLVVDCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEKLLEKG WKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEA ELGSKGRVLLRKSGTEPLIRVMVEGEDETLVKQSALKIAQAVKDNC
Sequences:
>Translated_446_residues MSDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLESALEAGLAAAGLKATFTGPM PTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGTKLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYI EFCKSTFPSKLSLSGLKLVVDCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEKLLEKG WKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEA ELGSKGRVLLRKSGTEPLIRVMVEGEDETLVKQSALKIAQAVKDNC >Mature_445_residues SDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLESALEAGLAAAGLKATFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGTKLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYIE FCKSTFPSKLSLSGLKLVVDCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLAF DGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEKLLEKGW KIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEAE LGSKGRVLLRKSGTEPLIRVMVEGEDETLVKQSALKIAQAVKDNC
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=441, Percent_Identity=76.6439909297052, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI1788361, Length=445, Percent_Identity=24.9438202247191, Blast_Score=92, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6323752, Length=393, Percent_Identity=24.9363867684478, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 47849; Mature: 47717
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH SALEAGLAAAGLKATFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGT HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCC KLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYIEFCKSTFPSKLSLSGLKLVV CCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE DCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA ECCCCCEEEECHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGI EECCCCEEEEEECCCCCCCCCCEEEHEEHHHHHHCCCCCCHHHHHHHHCCHHCCHHHHCC PFVRAAVGDRYVMEKLLEKGWKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTL HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHH HELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEAELGSKGRVLLRKSGTEPLIR HHHHCCCCHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE VMVEGEDETLVKQSALKIAQAVKDNC EEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTRKVIIGKDTRISGYMLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH SALEAGLAAAGLKATFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSYEGT HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCC KLPDDIELAIEAELDKDIECVESAELGKASRMVDAAGRYIEFCKSTFPSKLSLSGLKLVV CCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE DCANGATYHIAPNVFRELGAEVIAMGVEPNGLNINDQVGATDVRALQKRVVEEHAHLGLA ECCCCCEEEECHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEE FDGDGDRIIMVDHLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGI EECCCCEEEEEECCCCCCCCCCEEEHEEHHHHHHCCCCCCHHHHHHHHCCHHCCHHHHCC PFVRAAVGDRYVMEKLLEKGWKIGAENSGHVILLDKVTTGDAIVAGLQVLASVVGSEMTL HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHH HELAKGMTLYPQVLENVRFAGDNNPLEADAVKAAVSEVEAELGSKGRVLLRKSGTEPLIR HHHHCCCCHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE VMVEGEDETLVKQSALKIAQAVKDNC EEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA