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The map label for this gene is yhbY [H]

Identifier: 227080816

GI number: 227080816

Start: 634406

End: 634702

Strand: Reverse

Name: yhbY [H]

Synonym: VCM66_0593

Alternate gene names: 227080816

Gene position: 634702-634406 (Counterclockwise)

Preceding gene: 227080832

Following gene: 227080814

Centisome position: 21.94

GC content: 43.43

Gene sequence:

>297_bases
ATGAACCTAAGCAACAAACAAAAGCAGCATCTGAAAGGCTTGGCACACAACTTAAAACCTGTTGTGTTGATGGGAGCTAA
CGGACTCACAGAAGCTGTGCTGGCGGAAATCGAAATTGCGCTCGATCACCATGAACTGATTAAAGTGAAAGTCGTTTCTG
AAGATCGTGAAACTAAGCAATTGATCGTTGACGCAATTGTTCGCGAAACTGGTGCCGAGAAAGTACAGGTAATTGGTAAA
GTCCTAGTACTTTATCGCCAGTCTCAGCAACGCAAAATCGAATTGCCACGCAAATAA

Upstream 100 bases:

>100_bases
CCACTATCCAAGAAAGTCTGGTAGAAAATATAGTCTTCTAGCATAGATGGCGTTAAAATGACGGTTTTCAACCCTAATAT
TAAATAAATTTGGCCGCGTA

Downstream 100 bases:

>100_bases
TCAGCCAATGGATGAAAAAAGGTCGCGACTGCGACCTTTTTTACTTTTTCCTAAAATGATTGGCTAATTTGCGAAGCTAT
AGATATTCCACGCGATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNLSNKQKQHLKGLAHNLKPVVLMGANGLTEAVLAEIEIALDHHELIKVKVVSEDRETKQLIVDAIVRETGAEKVQVIGK
VLVLYRQSQQRKIELPRK

Sequences:

>Translated_98_residues
MNLSNKQKQHLKGLAHNLKPVVLMGANGLTEAVLAEIEIALDHHELIKVKVVSEDRETKQLIVDAIVRETGAEKVQVIGK
VLVLYRQSQQRKIELPRK
>Mature_98_residues
MNLSNKQKQHLKGLAHNLKPVVLMGANGLTEAVLAEIEIALDHHELIKVKVVSEDRETKQLIVDAIVRETGAEKVQVIGK
VLVLYRQSQQRKIELPRK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=79.3814432989691, Blast_Score=155, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 11038; Mature: 11038

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSNKQKQHLKGLAHNLKPVVLMGANGLTEAVLAEIEIALDHHELIKVKVVSEDRETKQ
CCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH
LIVDAIVRETGAEKVQVIGKVLVLYRQSQQRKIELPRK
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNLSNKQKQHLKGLAHNLKPVVLMGANGLTEAVLAEIEIALDHHELIKVKVVSEDRETKQ
CCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH
LIVDAIVRETGAEKVQVIGKVLVLYRQSQQRKIELPRK
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]