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The map label for this gene is 227080782

Identifier: 227080782

GI number: 227080782

Start: 582299

End: 583651

Strand: Direct

Name: 227080782

Synonym: VCM66_0558

Alternate gene names: NA

Gene position: 582299-583651 (Clockwise)

Preceding gene: 227080781

Following gene: 227080783

Centisome position: 20.13

GC content: 51.44

Gene sequence:

>1353_bases
TTGCGTAAGTTTTTGAAAAATATAGCCATGTTTAAGGTTGTATTGCTGGCTGTTCTCGCGTTGTCAATTTGGTCTACCCG
TATTCCCGATATGCCCTATCATCAAGTCACGCCTGAGTTGAGTCGGTCTGATTTCCATGTCATTGAATTTAATGATGAGG
GTGAAATGCACCTGCCTGGGCAATACGACATGTTGAAGGCGAGGTTAGCCAAAAACCCTGGAGCAGAACTGCTGATTTTT
ATTCACGGTTGGCACCATAATGCGGCTCCCACTGACGATAATTTTGTCGCTTTTCAACGTTTTCATCGCCAGATGGCGAA
GACCAATCCTGGCCTCATCGGGCTGTATATCGGTTGGCGGGGGGATCAGTACGATCCCTTGTGGTTGGATGGTTCAGACG
ATCCTGAAAGTCGAGTTGAAGCATTGGATTTTCCGACCATATTAACCAGCAAGCAGGTGGCGCGAAGAGTTGGCGAGCAT
GGGGTGAGAAAGCTGCTGAGTTCGCTGGATGAATTGCATCGTCAAGGAACGCTAGGGCGCTATATTTTAGTTGGGCACAG
CTTGGGTGGTGTGGTTGCGCTGCACGCCCGCAAACAGGCGATGTTGGATAATCTGGCGGCAGGTCGCGGTGAAACCCATT
TAACGGTGCTTTTAAACCCCGCTGCCTCTGCCAAAGAGTATCAGCCGCTGGATAAGTGGTTGAGTCCAGAAGGTTTTGGT
CCATCCATGCTGGTGTTGCAGTCCAAAACCGATTTTGCGGTACGTGAGGCCTTTAACTGGATCAAAGATGGCGAGCGCGC
CGTGGGTAACTCTTGGGCAATCACTCATGATGTGGACCCGTGCTCGGGGCGTGATTGTAATAAAGTGGTCAAAATCCCTC
AGTGGCTGCTTGAGCACGATGCGAAACCCGGTTGCATGCAGGTATTGCAAGGGGCTGGCTGGAAAATTCGCGCCAGATTG
CACGCCCGCAAAACCGTACAAAGTTGCGAAGATGCCAACCGTCAGGCTGTGTGGGTACTTGCTGTGGCCGATGGTGTGAT
TGCTGGCCATAACGGCATTTTAACGGATGATCAGGCATTAGCTTTGAATGCTTGGATGAAGTCTAAGCTCACGGCAGCAA
CCGAAGTTGTTCCTGCTGAAGCCGTGGTGGAGCCCAGTGTTATCTCTCCCCATCTTAGCGATGAGCCTGTGCTGCCGAGC
ATGGAAAACATACCCACAGAGGTTGCAACTGAGCCGCTTTCAAGTGCGGTAGAGCTTGAGCCACAAGAGAGCGAGAGTGC
TGTGCCAGCGATTTCTGAACCCACGCTTGAGGCACCTTTGGTTGCTCAACCGGAAGAGAGAGCACCACAGTAA

Upstream 100 bases:

>100_bases
AGGTGAGAAAGTCCCTCATTCAGCCTCTGGTGAAGCATTGAAGTTGAACATATAATGGCCGCCCGCCCGAGTCTGGGTAT
CTGTTTTTTGGTAAGATTCC

Downstream 100 bases:

>100_bases
GTTTTTTGTCTGCTGCGCCTCTTGATAGGAATGCACTTTGGGCACGGACTCCGTTTTATGTACAATGGCGCGGCCATTTA
ACCTTGTAGGAAGCGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MRKFLKNIAMFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPGQYDMLKARLAKNPGAELLIF
IHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWRGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEH
GVRKLLSSLDELHRQGTLGRYILVGHSLGGVVALHARKQAMLDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHDAKPGCMQVLQGAGWKIRARL
HARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQALALNAWMKSKLTAATEVVPAEAVVEPSVISPHLSDEPVLPS
MENIPTEVATEPLSSAVELEPQESESAVPAISEPTLEAPLVAQPEERAPQ

Sequences:

>Translated_450_residues
MRKFLKNIAMFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPGQYDMLKARLAKNPGAELLIF
IHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWRGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEH
GVRKLLSSLDELHRQGTLGRYILVGHSLGGVVALHARKQAMLDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHDAKPGCMQVLQGAGWKIRARL
HARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQALALNAWMKSKLTAATEVVPAEAVVEPSVISPHLSDEPVLPS
MENIPTEVATEPLSSAVELEPQESESAVPAISEPTLEAPLVAQPEERAPQ
>Mature_450_residues
MRKFLKNIAMFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPGQYDMLKARLAKNPGAELLIF
IHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWRGDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEH
GVRKLLSSLDELHRQGTLGRYILVGHSLGGVVALHARKQAMLDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHDAKPGCMQVLQGAGWKIRARL
HARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQALALNAWMKSKLTAATEVVPAEAVVEPSVISPHLSDEPVLPS
MENIPTEVATEPLSSAVELEPQESESAVPAISEPTLEAPLVAQPEERAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49639; Mature: 49639

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLKNIAMFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEECCCCCEECCC
QYDMLKARLAKNPGAELLIFIHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWR
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
GDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEHGVRKLLSSLDELHRQGTLGR
CCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YILVGHSLGGVVALHARKQAMLDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
EEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCCHHHHHCCCCCCC
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHD
CCEEEEECCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
AKPGCMQVLQGAGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQAL
CCCHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCCCCCCHH
ALNAWMKSKLTAATEVVPAEAVVEPSVISPHLSDEPVLPSMENIPTEVATEPLSSAVELE
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHEECC
PQESESAVPAISEPTLEAPLVAQPEERAPQ
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRKFLKNIAMFKVVLLAVLALSIWSTRIPDMPYHQVTPELSRSDFHVIEFNDEGEMHLPG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEECCCCCEECCC
QYDMLKARLAKNPGAELLIFIHGWHHNAAPTDDNFVAFQRFHRQMAKTNPGLIGLYIGWR
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECC
GDQYDPLWLDGSDDPESRVEALDFPTILTSKQVARRVGEHGVRKLLSSLDELHRQGTLGR
CCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
YILVGHSLGGVVALHARKQAMLDNLAAGRGETHLTVLLNPAASAKEYQPLDKWLSPEGFG
EEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCCHHHHHCCCCCCC
PSMLVLQSKTDFAVREAFNWIKDGERAVGNSWAITHDVDPCSGRDCNKVVKIPQWLLEHD
CCEEEEECCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
AKPGCMQVLQGAGWKIRARLHARKTVQSCEDANRQAVWVLAVADGVIAGHNGILTDDQAL
CCCHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCCCCCCHH
ALNAWMKSKLTAATEVVPAEAVVEPSVISPHLSDEPVLPSMENIPTEVATEPLSSAVELE
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHEECC
PQESESAVPAISEPTLEAPLVAQPEERAPQ
CCCCCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA