| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is cysW [H]
Identifier: 227080723
GI number: 227080723
Start: 529346
End: 530209
Strand: Direct
Name: cysW [H]
Synonym: VCM66_0498
Alternate gene names: 227080723
Gene position: 529346-530209 (Clockwise)
Preceding gene: 227080722
Following gene: 227080724
Centisome position: 18.3
GC content: 51.5
Gene sequence:
>864_bases ATGGCACACTCTCAGCCTTTACGTGTCGGTGAAAAGCCGTGGGTGAAATGGAGTTTGATCGCATTGGCTCTGTTATTGGT GGCCGTACTGCTGCTGATCCCACTGCTGAGCATTTTCCAACAAGCGTTCGCCAACGGTATTAGCGCTTATTTTAGTTACT TTAATGACCCCGATACGCGCCACGCGATTGGGTTAACTCTGGTGGTGGCGCTACTGACAGTGCCAATCAATCTGGTGTTT GGTGTGCTGCTCTCTTGGCTAGTGACCCGCTTTGAATTTGTTGGTCGCAAGTTTTTGATCACTTTGATTGATATTCCGTT CGCTGTTTCTCCGGTGGTGGCGGGGCTACTTTACCTGCTGCTCTATGGCACTAGTGGCTGGTTGGGCGAATGGTTGTATG AGCGCGATCTGCAAATCATGTTTGCTTGGCCGGGCATTGTACTGGTGACTGTGTTTGTGACCTGTCCGTTTGTGGCGCGT GAGCTAATTCCACTTATGCAGCAGCAAGGACGTTCGGATGAAGAAGCCGCGGTGATTTTGGGCGCATCATGGTGGCAACT GTTTCGCCGAGTCACTCTGCCTAACATTAAGTGGGCGCTGATTTATGGCGTGATCCTCACCAATGCTCGCGCGGTGGGGG AGTTTGGCGCGGTAGCGGTGGTTTCAGGCAACATTCGTGGTGAAACCAATACCTTGCCTTTGCATGTACAGCTTCTGTAC GAGGATTATCAATCGCAAGCGGCCTTTGCTAGCGCTTCGCTACTGGCGTTTATCGCCCTATTAACACTATTACTGAAAGC TTTGGTCGAGTGGCGTCAAGAGCGCCTTCAGGCGGTCGAGCATAATGAGCAGGGAACCTTATGA
Upstream 100 bases:
>100_bases GCCTCGGTTGTGCTGCTGACCTCACTTTTGTTACTGCTGATGATTAACCTCTGGCAAGGCGCTTATCTGCGTCGCATTCA CGGACGATAGGAATCAGTTT
Downstream 100 bases:
>100_bases GCATTCGTCTAGATAATATCTCTAAACATTTTGGCCAGTTTCAGGCGCTTGCCCCGCTTTCTCTCAAGATTGAAGATGGT GAAATGATTGGTTTGTTAGG
Product: sulfate ABC transporter, permease protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAHSQPLRVGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIGLTLVVALLTVPINLVF GVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWLGEWLYERDLQIMFAWPGIVLVTVFVTCPFVAR ELIPLMQQQGRSDEEAAVILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY EDYQSQAAFASASLLAFIALLTLLLKALVEWRQERLQAVEHNEQGTL
Sequences:
>Translated_287_residues MAHSQPLRVGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIGLTLVVALLTVPINLVF GVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWLGEWLYERDLQIMFAWPGIVLVTVFVTCPFVAR ELIPLMQQQGRSDEEAAVILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY EDYQSQAAFASASLLAFIALLTLLLKALVEWRQERLQAVEHNEQGTL >Mature_286_residues AHSQPLRVGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIGLTLVVALLTVPINLVFG VLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWLGEWLYERDLQIMFAWPGIVLVTVFVTCPFVARE LIPLMQQQGRSDEEAAVILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLYE DYQSQAAFASASLLAFIALLTLLLKALVEWRQERLQAVEHNEQGTL
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=287, Percent_Identity=58.5365853658537, Blast_Score=350, Evalue=8e-98, Organism=Escherichia coli, GI1788764, Length=204, Percent_Identity=39.7058823529412, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI1786980, Length=219, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32033; Mature: 31902
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSQPLRVGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HAIGLTLVVALLTVPINLVFGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LYGTSGWLGEWLYERDLQIMFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAVIL HHCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY CHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCEEEHHHHH EDYQSQAAFASASLLAFIALLTLLLKALVEWRQERLQAVEHNEQGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AHSQPLRVGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HAIGLTLVVALLTVPINLVFGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LYGTSGWLGEWLYERDLQIMFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAVIL HHCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY CHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCEEEHHHHH EDYQSQAAFASASLLAFIALLTLLLKALVEWRQERLQAVEHNEQGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]