| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is folK-1 [H]
Identifier: 227080708
GI number: 227080708
Start: 515728
End: 516315
Strand: Direct
Name: folK-1 [H]
Synonym: VCM66_0483
Alternate gene names: 227080708
Gene position: 515728-516315 (Clockwise)
Preceding gene: 227080707
Following gene: 227080709
Centisome position: 17.83
GC content: 51.19
Gene sequence:
>588_bases TTGGCTCCGCATCCGCTTGACCAAGCCGGGCGCAGTGCCGCAAGCCAAAGGAGTCGGCGTGATCATCGAGCGAGCGCGTG GATGATCACCGCTTATATTGGTGTGGGCTCAAATCAGGATCGCCATCAGTCGATTGAAGCTGGCCTTCGTGCATTAGCCG AGCTGGCGAGCCAGTGGCGTCTGTCCACGATTTATGAGTGTCCATCCGTTGGGTTTGCCAGCCATCCTTTCTTCAATCTG ATGGTTGAGATGGAGACAGAGCTCGCGCTGCCTGAATTGATGAAGCAGTTAAAAGCGATCGAGCTGCGTTGTGGCCGTTT GCCGAATGCACAAAAGTATCAGGATCGAACACTGGATCTTGATATTGTGCTGTATGGCGATTGTGTATCGGAGAATGATC CAGTGCTGCCTCGACCGGATATCTATCGCTATCCGTTTGTGATTCAACCTTTATATGAGCTCTGTCCGCAGCGAGTGATT GCTGGTGATGGTCGAACTGTTGAGCAGATTTGGCAACAAGCGCAGGATTTAGCATCACTCACCCCAGTACCGATCTGGTT TTCTATTAACGAGAAGAAACAATCATGA
Upstream 100 bases:
>100_bases GCCAAGCTGTGCTGGAGCATATCGAACAAGGGCGTTTTTTACTGGTAGAGCGTGTGGCTGAAGAAGTGGCTGAACTGATC ATGACTCGCTTTGCTGTGCC
Downstream 100 bases:
>100_bases GTTATTTTGAGTCGTTCATTCTGGCTTTAATTCAAGGCTTTACCGAGTTTTTACCGATTTCTAGCTCCGCACACCTGATC TTGCCTTCGGCTATTTTAGG
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAPHPLDQAGRSAASQRSRRDHRASAWMITAYIGVGSNQDRHQSIEAGLRALAELASQWRLSTIYECPSVGFASHPFFNL MVEMETELALPELMKQLKAIELRCGRLPNAQKYQDRTLDLDIVLYGDCVSENDPVLPRPDIYRYPFVIQPLYELCPQRVI AGDGRTVEQIWQQAQDLASLTPVPIWFSINEKKQS
Sequences:
>Translated_195_residues MAPHPLDQAGRSAASQRSRRDHRASAWMITAYIGVGSNQDRHQSIEAGLRALAELASQWRLSTIYECPSVGFASHPFFNL MVEMETELALPELMKQLKAIELRCGRLPNAQKYQDRTLDLDIVLYGDCVSENDPVLPRPDIYRYPFVIQPLYELCPQRVI AGDGRTVEQIWQQAQDLASLTPVPIWFSINEKKQS >Mature_194_residues APHPLDQAGRSAASQRSRRDHRASAWMITAYIGVGSNQDRHQSIEAGLRALAELASQWRLSTIYECPSVGFASHPFFNLM VEMETELALPELMKQLKAIELRCGRLPNAQKYQDRTLDLDIVLYGDCVSENDPVLPRPDIYRYPFVIQPLYELCPQRVIA GDGRTVEQIWQQAQDLASLTPVPIWFSINEKKQS
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=148, Percent_Identity=35.8108108108108, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 22141; Mature: 22009
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPHPLDQAGRSAASQRSRRDHRASAWMITAYIGVGSNQDRHQSIEAGLRALAELASQWR CCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LSTIYECPSVGFASHPFFNLMVEMETELALPELMKQLKAIELRCGRLPNAQKYQDRTLDL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEE DIVLYGDCVSENDPVLPRPDIYRYPFVIQPLYELCPQRVIAGDGRTVEQIWQQAQDLASL EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHC TPVPIWFSINEKKQS CCCEEEEEECCCCCC >Mature Secondary Structure APHPLDQAGRSAASQRSRRDHRASAWMITAYIGVGSNQDRHQSIEAGLRALAELASQWR CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LSTIYECPSVGFASHPFFNLMVEMETELALPELMKQLKAIELRCGRLPNAQKYQDRTLDL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEE DIVLYGDCVSENDPVLPRPDIYRYPFVIQPLYELCPQRVIAGDGRTVEQIWQQAQDLASL EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHC TPVPIWFSINEKKQS CCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1325970; 8202364; 9278503; 1657875; 2537812; 10378268; 10452528 [H]