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The map label for this gene is yggE [H]

Identifier: 227080693

GI number: 227080693

Start: 498249

End: 498965

Strand: Direct

Name: yggE [H]

Synonym: VCM66_0468

Alternate gene names: 227080693

Gene position: 498249-498965 (Clockwise)

Preceding gene: 227080692

Following gene: 227080694

Centisome position: 17.23

GC content: 46.44

Gene sequence:

>717_bases
ATGACATTAAGGATCGAAACGATGAAATTATTTGCACCGGTGGTTTTACTGCTCTCTGTTCTTTCAAGCCCTACCTTTGC
ACAGGAATGGGATTTTCCACATATTTCGACTTCAGGTTATGGTGAAGTGACTGCTGTACCTGATATGGCGGAGTTTTCCG
TGAAGGTTGTTGAATCGACAATGAATGCGGAACAAGCGAAAGCGGCAGTGGATAAGGCGGTAACGGAATTCACCTCAAAA
TTGGTGAAATCCGGTGTCGCACAGCAGAATATCTCGAGCTCAAATCTGTACATCAACCCGCAATATCACTATCCAGCAAA
CGGTAAGCCAGAGTTAGTGGGCTATCAAGCTTCTCGCTCGATTACCGTCAGGGTCGAAGAGGTGAGTAAGCTGAATCAGT
ATCTGGATATCGCGTTAGAGTCTGGTATCAATCAAGTCAATAGCATTCAATTGAAGGTGCGTGATCAAGAGAAATACCAG
CAGCAAGCGCGTATGGCGGCGATTGAAGATGCCAAGCTCAAAGCTCAGTCTCTAGCTAAGGGATTTGAGCGCCGCTTAGA
AGGCGTTTGGCGGATAGACTACAACACGCCAAGTGTTGAGCCGATCATGATGCGAGCGGCGAATCTAAGCGAAAAAATGG
ATGTGGCAGATACCTATCAAGAGTCTTCCTTGGTGATTCGTGATCGAGTGGATGTGGTATATAAGTTGGCACCATAG

Upstream 100 bases:

>100_bases
AAAAGCGTACTACCTCAATAATTGACCGAGTCAAAGTTGTGTAATTTTTATGCGTAGAGACTGAATCTATGCACTGCTTC
GCTTATGATGTGGGCAGTCG

Downstream 100 bases:

>100_bases
CCAATGTTAAGTCAGCATAATGATGAAGAGTGGGGGCGACGAAAGTCGCCCCTATTTGCTGATTTTTATTCATATTTTAT
ACAAAGCCGCTTTTTCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTLRIETMKLFAPVVLLLSVLSSPTFAQEWDFPHISTSGYGEVTAVPDMAEFSVKVVESTMNAEQAKAAVDKAVTEFTSK
LVKSGVAQQNISSSNLYINPQYHYPANGKPELVGYQASRSITVRVEEVSKLNQYLDIALESGINQVNSIQLKVRDQEKYQ
QQARMAAIEDAKLKAQSLAKGFERRLEGVWRIDYNTPSVEPIMMRAANLSEKMDVADTYQESSLVIRDRVDVVYKLAP

Sequences:

>Translated_238_residues
MTLRIETMKLFAPVVLLLSVLSSPTFAQEWDFPHISTSGYGEVTAVPDMAEFSVKVVESTMNAEQAKAAVDKAVTEFTSK
LVKSGVAQQNISSSNLYINPQYHYPANGKPELVGYQASRSITVRVEEVSKLNQYLDIALESGINQVNSIQLKVRDQEKYQ
QQARMAAIEDAKLKAQSLAKGFERRLEGVWRIDYNTPSVEPIMMRAANLSEKMDVADTYQESSLVIRDRVDVVYKLAP
>Mature_237_residues
TLRIETMKLFAPVVLLLSVLSSPTFAQEWDFPHISTSGYGEVTAVPDMAEFSVKVVESTMNAEQAKAAVDKAVTEFTSKL
VKSGVAQQNISSSNLYINPQYHYPANGKPELVGYQASRSITVRVEEVSKLNQYLDIALESGINQVNSIQLKVRDQEKYQQ
QARMAAIEDAKLKAQSLAKGFERRLEGVWRIDYNTPSVEPIMMRAANLSEKMDVADTYQESSLVIRDRVDVVYKLAP

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=212, Percent_Identity=37.7358490566038, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 26600; Mature: 26468

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRIETMKLFAPVVLLLSVLSSPTFAQEWDFPHISTSGYGEVTAVPDMAEFSVKVVEST
CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH
MNAEQAKAAVDKAVTEFTSKLVKSGVAQQNISSSNLYINPQYHYPANGKPELVGYQASRS
HCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCE
ITVRVEEVSKLNQYLDIALESGINQVNSIQLKVRDQEKYQQQARMAAIEDAKLKAQSLAK
EEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
GFERRLEGVWRIDYNTPSVEPIMMRAANLSEKMDVADTYQESSLVIRDRVDVVYKLAP
HHHHHHCCEEEEECCCCCCCHHHHHHHCCHHHCCHHHHHHCCCEEEEECCEEEEEECC
>Mature Secondary Structure 
TLRIETMKLFAPVVLLLSVLSSPTFAQEWDFPHISTSGYGEVTAVPDMAEFSVKVVEST
EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH
MNAEQAKAAVDKAVTEFTSKLVKSGVAQQNISSSNLYINPQYHYPANGKPELVGYQASRS
HCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCE
ITVRVEEVSKLNQYLDIALESGINQVNSIQLKVRDQEKYQQQARMAAIEDAKLKAQSLAK
EEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
GFERRLEGVWRIDYNTPSVEPIMMRAANLSEKMDVADTYQESSLVIRDRVDVVYKLAP
HHHHHHCCEEEEECCCCCCCHHHHHHHCCHHHCCHHHHHHCCCEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12542086 [H]