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The map label for this gene is mshA

Identifier: 227080620

GI number: 227080620

Start: 420176

End: 420712

Strand: Direct

Name: mshA

Synonym: VCM66_0394

Alternate gene names: NA

Gene position: 420176-420712 (Clockwise)

Preceding gene: 227080619

Following gene: 227080621

Centisome position: 14.53

GC content: 43.02

Gene sequence:

>537_bases
ATGGTAATAATGAAAAGACAAGGTGGTTTCACCCTAATCGAATTGGTCGTGGTGATTGTAATTCTCGGTATCTTGGCCGT
CACAGCAGCGCCACGTTTCTTAAACCTGCAAGGCGATGCGCGAGAAGCGTCTTTAGAAGGTCTTCGAGGTGCAGTTGCTG
GTGCAATGGGTATCTCATATGGACGAGCTGCAATTAAAGGCATTGAAACGTTAGACTACACAGCATATACAGATGCAAAT
ACACCTGGAACAGTTATTGATGGCATTGCCCATAAGTTTGGTTATCCAACGGCAGTAAATGATTCAACAGCAAATCTAGG
TGGTATTATGCAAACGCTAGATACTTCGAGTGAGTTTATTGCGTTGCAATCGTCTACAGGAACAAATAGTAATCAAGCTA
ATTTATGGATTGACATAGGCTTCAATGGTTATAACGATCTATGTGTCCGTTATACAGCTGCAACCTCTAATAATCCTGCA
ACGGTTGCTATGCAGACTGGGGTTGCTGGAACTGCTTGTGGTAAACCAGCGCAATAA

Upstream 100 bases:

>100_bases
CAAAATGAAAAAGGCAGCCAACATGAATTTGTTTATGAAGTTAACACTGGTCGCGTGACCGTAACCTTGCAGTAATGCTG
CGTATTCACATGAAAGAGAG

Downstream 100 bases:

>100_bases
TTTAAATATGGCTCGTGCATGTAACGAGCCTATTTTATGAAAATTATAGGTAAAGGTTTTACCCTTATTGAACTGGTAGT
GGTGATTATCCTACTAGGGA

Product: MSHA pilin protein MshA

Products: NA

Alternate protein names: Methylation Site Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin A; MAnnose-Sensitive Hemagglutinin A; V10 Pilin; Msha Pilin Protein Msha; MshA Mannose-Sensitive Haemaglutinin; Methylation; Mannose-Sensitive Hemagglutinin A

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MVIMKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRAAIKGIETLDYTAYTDAN
TPGTVIDGIAHKFGYPTAVNDSTANLGGIMQTLDTSSEFIALQSSTGTNSNQANLWIDIGFNGYNDLCVRYTAATSNNPA
TVAMQTGVAGTACGKPAQ

Sequences:

>Translated_178_residues
MVIMKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRAAIKGIETLDYTAYTDAN
TPGTVIDGIAHKFGYPTAVNDSTANLGGIMQTLDTSSEFIALQSSTGTNSNQANLWIDIGFNGYNDLCVRYTAATSNNPA
TVAMQTGVAGTACGKPAQ
>Mature_178_residues
MVIMKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRAAIKGIETLDYTAYTDAN
TPGTVIDGIAHKFGYPTAVNDSTANLGGIMQTLDTSSEFIALQSSTGTNSNQANLWIDIGFNGYNDLCVRYTAATSNNPA
TVAMQTGVAGTACGKPAQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18438; Mature: 18438

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIMKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISY
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
GRAAIKGIETLDYTAYTDANTPGTVIDGIAHKFGYPTAVNDSTANLGGIMQTLDTSSEFI
HHHHHHHCHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEE
ALQSSTGTNSNQANLWIDIGFNGYNDLCVRYTAATSNNPATVAMQTGVAGTACGKPAQ
EEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVIMKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISY
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
GRAAIKGIETLDYTAYTDANTPGTVIDGIAHKFGYPTAVNDSTANLGGIMQTLDTSSEFI
HHHHHHHCHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEE
ALQSSTGTNSNQANLWIDIGFNGYNDLCVRYTAATSNNPATVAMQTGVAGTACGKPAQ
EEECCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA