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The map label for this gene is mshB

Identifier: 227080619

GI number: 227080619

Start: 419560

End: 420150

Strand: Direct

Name: mshB

Synonym: VCM66_0393

Alternate gene names: NA

Gene position: 419560-420150 (Clockwise)

Preceding gene: 227080618

Following gene: 227080620

Centisome position: 14.5

GC content: 47.38

Gene sequence:

>591_bases
ATGCACGCCGTACGTTACGTAAGTGAGTTGAAAAATATGAAGAAAATGCAGCAAGGCTTTTCATTGGTGGAACTGGTCAT
CGTGATTGTGGTGGTTGGGTTACTGGCTGTCGCCGCTTTGCCCCGTTTTCTTGATGTGACCGATGAGGCGAAGAAAGCCA
GTATTGAGGGGGTTGCAGGGGGCTTTGCCACTGGTGTTCTCTCTGCACGAGCGCAATGGGAGGCGCAAGCTCGCCCCACG
TTGACCGCCAATAATTACCCTTCCATTAATTATGATGGAGTTAATTTTTGGTTAACCACCTCCGCAACCAGCGGCTATCG
TGATGGTTATCCTTTGGGCTTGAATACCGATGATGCGACTTATCCTTCAGGTCTCACGGATCAGGCTTGTATAGATTTAA
TGAACAATTTGCTGCAAAACCCACCTCAAGTGGGCACGGAAACTCAAGCGGCGAGCAATTCTAATTACAAATATTCAGCG
AAAGCGAATAGTGGTGCTGCCACATGCACTTATGCGCAAAATGAAAAAGGCAGCCAACATGAATTTGTTTATGAAGTTAA
CACTGGTCGCGTGACCGTAACCTTGCAGTAA

Upstream 100 bases:

>100_bases
ACGTGGAATTGAAGGATCGCTACTTTGCGATAAATGCCAGTTTTTTGATGCGCTGAATTTTTGACACTTTAACCACATCA
AAGCTAAAAATAGGCGTATA

Downstream 100 bases:

>100_bases
TGCTGCGTATTCACATGAAAGAGAGATGGTAATAATGAAAAGACAAGGTGGTTTCACCCTAATCGAATTGGTCGTGGTGA
TTGTAATTCTCGGTATCTTG

Product: MSHA pilin protein MshB

Products: NA

Alternate protein names: Methylation Site Containing Protein; Msha Pilin Protein Mshb; Pilin Protein; Prepilin-Type Cleavage/Methylation; Type IV Pilus Prepilin-Like Protein; Methylation

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MHAVRYVSELKNMKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAQARPT
LTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACIDLMNNLLQNPPQVGTETQAASNSNYKYSA
KANSGAATCTYAQNEKGSQHEFVYEVNTGRVTVTLQ

Sequences:

>Translated_196_residues
MHAVRYVSELKNMKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAQARPT
LTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACIDLMNNLLQNPPQVGTETQAASNSNYKYSA
KANSGAATCTYAQNEKGSQHEFVYEVNTGRVTVTLQ
>Mature_196_residues
MHAVRYVSELKNMKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAQARPT
LTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDATYPSGLTDQACIDLMNNLLQNPPQVGTETQAASNSNYKYSA
KANSGAATCTYAQNEKGSQHEFVYEVNTGRVTVTLQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21111; Mature: 21111

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVRYVSELKNMKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
GFATGVLSARAQWEAQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDAT
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
YPSGLTDQACIDLMNNLLQNPPQVGTETQAASNSNYKYSAKANSGAATCTYAQNEKGSQH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCC
EFVYEVNTGRVTVTLQ
EEEEEECCCEEEEEEC
>Mature Secondary Structure
MHAVRYVSELKNMKKMQQGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
GFATGVLSARAQWEAQARPTLTANNYPSINYDGVNFWLTTSATSGYRDGYPLGLNTDDAT
HHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
YPSGLTDQACIDLMNNLLQNPPQVGTETQAASNSNYKYSAKANSGAATCTYAQNEKGSQH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCC
EFVYEVNTGRVTVTLQ
EEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA