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The map label for this gene is mshF

Identifier: 227080618

GI number: 227080618

Start: 419063

End: 419515

Strand: Direct

Name: mshF

Synonym: VCM66_0392

Alternate gene names: NA

Gene position: 419063-419515 (Clockwise)

Preceding gene: 227080617

Following gene: 227080619

Centisome position: 14.49

GC content: 46.8

Gene sequence:

>453_bases
ATGAAAATAGGATTTGAGCGCGTCCGATTTGTTCTCTGGTTTGTCTTGGTGGTGGTTTTATTGACGGCGATGTTTTCGGT
ATGGCGGTCGATGTTCAGTGATATGCTACACACCGCCTTAGAGATGACAAGGTTGCAACTGATTGATCGGGCAAACACTT
ATAAGCAAGAGTGGGTATTGCAAGGGCGTCCTGCACTCTTACAGATAGAACAAGCCGAGATTCCAATGCAACATGGGTGG
GTTTTTCCCAAGCTCGATCAAGGAGTTGATTGTGAAAAAGTGCTATTTTTGCTCTATCCTGATCGTAAGGTGCTGGATTG
GTTACCAAGAGTGACTGCCCTCCAGCGCGCGAATGGCTACCAGTGCCGTTATCAATACGGTGATAGGGTGCAACTCGACG
TGGAATTGAAGGATCGCTACTTTGCGATAAATGCCAGTTTTTTGATGCGCTGA

Upstream 100 bases:

>100_bases
AACCTATTTTATTGGTGTTTGTCGCGGCCATGGTACTGGTATTGGCGCTGGGCATCTTCCTTCCTATGTGGGGCATGATG
GATGCACTCAAGGGCTGATA

Downstream 100 bases:

>100_bases
ATTTTTGACACTTTAACCACATCAAAGCTAAAAATAGGCGTATAATGCACGCCGTACGTTACGTAAGTGAGTTGAAAAAT
ATGAAGAAAATGCAGCAAGG

Product: MSHA biogenesis protein MshF

Products: NA

Alternate protein names: Msha Biogenesis Protein Mshf

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKIGFERVRFVLWFVLVVVLLTAMFSVWRSMFSDMLHTALEMTRLQLIDRANTYKQEWVLQGRPALLQIEQAEIPMQHGW
VFPKLDQGVDCEKVLFLLYPDRKVLDWLPRVTALQRANGYQCRYQYGDRVQLDVELKDRYFAINASFLMR

Sequences:

>Translated_150_residues
MKIGFERVRFVLWFVLVVVLLTAMFSVWRSMFSDMLHTALEMTRLQLIDRANTYKQEWVLQGRPALLQIEQAEIPMQHGW
VFPKLDQGVDCEKVLFLLYPDRKVLDWLPRVTALQRANGYQCRYQYGDRVQLDVELKDRYFAINASFLMR
>Mature_150_residues
MKIGFERVRFVLWFVLVVVLLTAMFSVWRSMFSDMLHTALEMTRLQLIDRANTYKQEWVLQGRPALLQIEQAEIPMQHGW
VFPKLDQGVDCEKVLFLLYPDRKVLDWLPRVTALQRANGYQCRYQYGDRVQLDVELKDRYFAINASFLMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17893; Mature: 17893

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGFERVRFVLWFVLVVVLLTAMFSVWRSMFSDMLHTALEMTRLQLIDRANTYKQEWVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
QGRPALLQIEQAEIPMQHGWVFPKLDQGVDCEKVLFLLYPDRKVLDWLPRVTALQRANGY
CCCCCEEEEHHHCCCHHHCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHCCCC
QCRYQYGDRVQLDVELKDRYFAINASFLMR
EEEEECCCEEEEEEEECCEEEEEEHHHHCC
>Mature Secondary Structure
MKIGFERVRFVLWFVLVVVLLTAMFSVWRSMFSDMLHTALEMTRLQLIDRANTYKQEWVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
QGRPALLQIEQAEIPMQHGWVFPKLDQGVDCEKVLFLLYPDRKVLDWLPRVTALQRANGY
CCCCCEEEEHHHCCCHHHCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHCCCC
QCRYQYGDRVQLDVELKDRYFAINASFLMR
EEEEECCCEEEEEEEECCEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA