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The map label for this gene is mshI

Identifier: 227080610

GI number: 227080610

Start: 410023

End: 411462

Strand: Direct

Name: mshI

Synonym: VCM66_0384

Alternate gene names: NA

Gene position: 410023-411462 (Clockwise)

Preceding gene: 227080609

Following gene: 227080611

Centisome position: 14.18

GC content: 48.89

Gene sequence:

>1440_bases
ATGAAGAAACCGAGTTGGATAGAGAAACTGATTGCCCCTAAGGTTGCCTCGCAACAGTTATATGTTGTGGTGCAGCCAGA
GCACCTGTACTTCACATCCGATGATTTATCGCCTATTCCTCCCCAGCCGTTACAGCAACAAAGTTGGCAAGCGGTATTGG
TGCAAACGCTGCAAAAGCACGCTGTCCATGATGTACAAATCCACCTTGTACTGCATTCACAGCTTTATCAAACTTATCAG
ATTGAACAGCCGAGTATTCCGCGTGAAGAGTGGTCGGCAGCCTTGCCTTTCTTGCTCAAAGATATGTTGAGTGAGAAAGT
GACGGATGTAGTGGCGGATGCTCACCCTCTTCCCGGCAGTGGTAAAGTACAAGCCTATGTGATCAGCAAGCGTACTATTC
TTGAGTTGCAAAGCATGGCGGTGTCGGCGGGATTAACGCTAGGACGAGTGATCCCCGAGCAAGCGATTTGGGGATTGGTG
GGCGGAGAATTGAGCCACTTCCTGTTGCTGCATCGCAGCATGGGTGGCAGCTTTAAGCTGGATGCTTTCGTTGATCGTCA
GTGCAGTTTTCAACGCACTTTACGTGGGATCACTGCGCCTGTGACTGATAACGCAGCCAGTGCCCTTCAGTTAGATAGCT
TGGCGTTAGAGCTACAGCGCTCGATTGATTACTTATCCGCCCAGTTAAAGGGCGGCTCTTTACAACAGCTAAAAGTGTGT
TGTGATGGTGAAGATCAACAGGCTTTGATCACCGGACTCAATGAGCGCTTAAGTGTGCGAGCGTCAGGACTGGATGGTGA
AGCGACCATCTGTGGTGAACAACTGGCACGTTATGCGCGCAATATCCCGCAAGAAACCATCAATTTCTATCAAGATCACC
TCAAGCCGAAGCGTGAAAAGTTCACCTTAACCAATCTCTTGTTAGCGTGGTTGGCCTTGAGCGTTGTGTTATTGCTTGGG
TACGCAGGGGTGGGTTATCAAAACTGGGTGATCCAACAGCAGTGGCAAGAGCAGCAACAACATAATCAATCGTTAACAGA
ACAAGCGGCTCACTTACGTCAGCAGGTGGCGGTTCATCTTCCTTCGCCCGCTAAACAGGCGGCGATAGGGCGCATAAAGC
AAGAGATCTCTAGCAAACAGCAAGCATTAGACGCGATTGGGCAGTTTGATGTGGCTCAGCAAACGGGCTATTCCGGCGTA
TTGAACTCTTTGGCTCAATTGGCGCGTAGCGATATCTCTTTAAGCAGTATTACTTTGGATTCCTCGCAATTAAATGTGCA
GGGACTCGCTCGTGATCCTGCCGCGATTCCAAACTGGATCAGTCAATTTAAACAAGAACTGCATCTGATGGGCAGAAGCT
TTGAGCAACTGAAAATTGGCCGTAATGATCAAGACATGATCACCTTTGAACTCAACACTCAGCGAGGAGAACAAAGATGA

Upstream 100 bases:

>100_bases
GCCTCCTTTGCCACCAGAGCCATTGAAACGCCCCCCGCGTCTCTCTGTAAAGCCCATCGGCAAACGTAATCGATGGCGAA
CCAAATAGCAGTGGTAGAGA

Downstream 100 bases:

>100_bases
AATCGGGTTGGCAAAACTTTGAAAGTCGCTTCTCCGCACTGTCGCAACGAGAGAAGGTGTTAATTACGCTGTGCGGTAGC
GTGCTTATTGTGATGATGCT

Product: MSHA biogenesis protein MshI

Products: NA

Alternate protein names: Msha Biogenesis Protein Mshi; Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKKPSWIEKLIAPKVASQQLYVVVQPEHLYFTSDDLSPIPPQPLQQQSWQAVLVQTLQKHAVHDVQIHLVLHSQLYQTYQ
IEQPSIPREEWSAALPFLLKDMLSEKVTDVVADAHPLPGSGKVQAYVISKRTILELQSMAVSAGLTLGRVIPEQAIWGLV
GGELSHFLLLHRSMGGSFKLDAFVDRQCSFQRTLRGITAPVTDNAASALQLDSLALELQRSIDYLSAQLKGGSLQQLKVC
CDGEDQQALITGLNERLSVRASGLDGEATICGEQLARYARNIPQETINFYQDHLKPKREKFTLTNLLLAWLALSVVLLLG
YAGVGYQNWVIQQQWQEQQQHNQSLTEQAAHLRQQVAVHLPSPAKQAAIGRIKQEISSKQQALDAIGQFDVAQQTGYSGV
LNSLAQLARSDISLSSITLDSSQLNVQGLARDPAAIPNWISQFKQELHLMGRSFEQLKIGRNDQDMITFELNTQRGEQR

Sequences:

>Translated_479_residues
MKKPSWIEKLIAPKVASQQLYVVVQPEHLYFTSDDLSPIPPQPLQQQSWQAVLVQTLQKHAVHDVQIHLVLHSQLYQTYQ
IEQPSIPREEWSAALPFLLKDMLSEKVTDVVADAHPLPGSGKVQAYVISKRTILELQSMAVSAGLTLGRVIPEQAIWGLV
GGELSHFLLLHRSMGGSFKLDAFVDRQCSFQRTLRGITAPVTDNAASALQLDSLALELQRSIDYLSAQLKGGSLQQLKVC
CDGEDQQALITGLNERLSVRASGLDGEATICGEQLARYARNIPQETINFYQDHLKPKREKFTLTNLLLAWLALSVVLLLG
YAGVGYQNWVIQQQWQEQQQHNQSLTEQAAHLRQQVAVHLPSPAKQAAIGRIKQEISSKQQALDAIGQFDVAQQTGYSGV
LNSLAQLARSDISLSSITLDSSQLNVQGLARDPAAIPNWISQFKQELHLMGRSFEQLKIGRNDQDMITFELNTQRGEQR
>Mature_479_residues
MKKPSWIEKLIAPKVASQQLYVVVQPEHLYFTSDDLSPIPPQPLQQQSWQAVLVQTLQKHAVHDVQIHLVLHSQLYQTYQ
IEQPSIPREEWSAALPFLLKDMLSEKVTDVVADAHPLPGSGKVQAYVISKRTILELQSMAVSAGLTLGRVIPEQAIWGLV
GGELSHFLLLHRSMGGSFKLDAFVDRQCSFQRTLRGITAPVTDNAASALQLDSLALELQRSIDYLSAQLKGGSLQQLKVC
CDGEDQQALITGLNERLSVRASGLDGEATICGEQLARYARNIPQETINFYQDHLKPKREKFTLTNLLLAWLALSVVLLLG
YAGVGYQNWVIQQQWQEQQQHNQSLTEQAAHLRQQVAVHLPSPAKQAAIGRIKQEISSKQQALDAIGQFDVAQQTGYSGV
LNSLAQLARSDISLSSITLDSSQLNVQGLARDPAAIPNWISQFKQELHLMGRSFEQLKIGRNDQDMITFELNTQRGEQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53354; Mature: 53354

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPSWIEKLIAPKVASQQLYVVVQPEHLYFTSDDLSPIPPQPLQQQSWQAVLVQTLQKH
CCCHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
AVHDVQIHLVLHSQLYQTYQIEQPSIPREEWSAALPFLLKDMLSEKVTDVVADAHPLPGS
CCCCEEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GKVQAYVISKRTILELQSMAVSAGLTLGRVIPEQAIWGLVGGELSHFLLLHRSMGGSFKL
CCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
DAFVDRQCSFQRTLRGITAPVTDNAASALQLDSLALELQRSIDYLSAQLKGGSLQQLKVC
HHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
CDGEDQQALITGLNERLSVRASGLDGEATICGEQLARYARNIPQETINFYQDHLKPKREK
ECCCCCHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
FTLTNLLLAWLALSVVLLLGYAGVGYQNWVIQQQWQEQQQHNQSLTEQAAHLRQQVAVHL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSPAKQAAIGRIKQEISSKQQALDAIGQFDVAQQTGYSGVLNSLAQLARSDISLSSITLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHEEEEC
SSQLNVQGLARDPAAIPNWISQFKQELHLMGRSFEQLKIGRNDQDMITFELNTQRGEQR
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKKPSWIEKLIAPKVASQQLYVVVQPEHLYFTSDDLSPIPPQPLQQQSWQAVLVQTLQKH
CCCHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
AVHDVQIHLVLHSQLYQTYQIEQPSIPREEWSAALPFLLKDMLSEKVTDVVADAHPLPGS
CCCCEEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GKVQAYVISKRTILELQSMAVSAGLTLGRVIPEQAIWGLVGGELSHFLLLHRSMGGSFKL
CCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
DAFVDRQCSFQRTLRGITAPVTDNAASALQLDSLALELQRSIDYLSAQLKGGSLQQLKVC
HHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
CDGEDQQALITGLNERLSVRASGLDGEATICGEQLARYARNIPQETINFYQDHLKPKREK
ECCCCCHHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
FTLTNLLLAWLALSVVLLLGYAGVGYQNWVIQQQWQEQQQHNQSLTEQAAHLRQQVAVHL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSPAKQAAIGRIKQEISSKQQALDAIGQFDVAQQTGYSGVLNSLAQLARSDISLSSITLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHEEEEC
SSQLNVQGLARDPAAIPNWISQFKQELHLMGRSFEQLKIGRNDQDMITFELNTQRGEQR
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA