Click here to switch to the map view.

The map label for this gene is engB [H]

Identifier: 227080347

GI number: 227080347

Start: 106614

End: 107276

Strand: Reverse

Name: engB [H]

Synonym: VCM66_0111

Alternate gene names: 227080347

Gene position: 107276-106614 (Counterclockwise)

Preceding gene: 227080353

Following gene: 227080345

Centisome position: 3.71

GC content: 47.66

Gene sequence:

>663_bases
GTGAGCGTAAAAATTCATTACCAAAACACGCATTTCATTACCAGTGCGCCTGATATTCGCCATCTTCCTGAAGATGAAGG
TATCGAAATTGCGTTTGCAGGACGCTCTAATGCTGGTAAGTCAAGTTCCCTTAATCGCCTGACCAACCAGAAAAATCTGG
CCAAAACCAGTAAGACTCCGGGTCGTACGCAGTTGATTAACCTTTTTAAAGTAGCAGACGGCTGTCATATCGTCGATTTG
CCCGGATATGGCTTTGCTCAAGTCCCGCTAGAGATGAAGCTCAAGTGGCAGCGAGCCCTTGGTGAATACTTACAAAAGCG
CCAAAGCCTAAAAGGCTTAGTGGTACTGATGGATATTCGTCATCCGATGAAAGACCTCGATCAGCAACTGATCATCTGGG
CGGTAGAGTGCGGAATTCCAGTACAGGTGATGCTGACTAAAGCGGATAAGCTAAAAAGTGGCGCTCGTAAAGCACAAGTA
TTGAAAGTGCGTGAAGAGGCAAAAACCTTTGGTGGCGATGTGGCCGTTGATGCTTTCTCTTCATTAAGCGGAATTGGTGT
CGATACTCTGCGCGCCAAACTGGATGAGTGGTATGCACCGATGTTGGCAGCTCTTGCCGAACAAGAAGAAGGCGAGCAGC
CTGAATCGTCTACCGACCAATAG

Upstream 100 bases:

>100_bases
CATGGTACAATAGGCGACCTTATGCCGAGCACGGTTATTTTACACAATTTCACAAAAAAGTAATCAATCGACTACACAAA
GTCGAGATGGAGTTAACACA

Downstream 100 bases:

>100_bases
TCTTAACACTATGTCACGACAAACCTCGCTCATGCGGGGTTTTTTATTACCACAATTCAGAGATGTCACTCAGGGCTGTC
GATGGTAGGCCAACAAATAT

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSVKIHYQNTHFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKVADGCHIVDL
PGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQV
LKVREEAKTFGGDVAVDAFSSLSGIGVDTLRAKLDEWYAPMLAALAEQEEGEQPESSTDQ

Sequences:

>Translated_220_residues
MSVKIHYQNTHFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKVADGCHIVDL
PGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQV
LKVREEAKTFGGDVAVDAFSSLSGIGVDTLRAKLDEWYAPMLAALAEQEEGEQPESSTDQ
>Mature_219_residues
SVKIHYQNTHFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKVADGCHIVDLP
GYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVL
KVREEAKTFGGDVAVDAFSSLSGIGVDTLRAKLDEWYAPMLAALAEQEEGEQPESSTDQ

Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI56549685, Length=185, Percent_Identity=32.4324324324324, Blast_Score=83, Evalue=2e-16,
Organism=Escherichia coli, GI145693205, Length=208, Percent_Identity=71.1538461538462, Blast_Score=307, Evalue=3e-85,
Organism=Saccharomyces cerevisiae, GI6320543, Length=130, Percent_Identity=33.8461538461538, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019987
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 24343; Mature: 24212

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKIHYQNTHFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTP
CEEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GRTQLINLFKVADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIR
CHHHHHHHHHHCCCCEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
HPMKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDVAVDAFS
CCHHHHHHHEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SLSGIGVDTLRAKLDEWYAPMLAALAEQEEGEQPESSTDQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVKIHYQNTHFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTP
EEEEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GRTQLINLFKVADGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIR
CHHHHHHHHHHCCCCEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
HPMKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTFGGDVAVDAFS
CCHHHHHHHEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SLSGIGVDTLRAKLDEWYAPMLAALAEQEEGEQPESSTDQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA