| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080337
Identifier: 227080337
GI number: 227080337
Start: 99152
End: 99367
Strand: Reverse
Name: 227080337
Synonym: VCM66_0101
Alternate gene names: NA
Gene position: 99367-99152 (Counterclockwise)
Preceding gene: 227080338
Following gene: 227080336
Centisome position: 3.44
GC content: 36.57
Gene sequence:
>216_bases GTGGATAACTCTGTGATAAATTTCTTTATTCACTGTCATCAAACCGCCTATTTCAAGGCTTTATTACAATTCATCGATTG GGGATACTTTCAAAATTACCCACAGCAAAATCAGGATCATCGCTACATATTGTGGATCGAAAATCACAAAACCACTTTAT CAACGCAATTCACAGGATTACCCACAGGTGCTGTCATTTTAATCACAAGTGGATAA
Upstream 100 bases:
>100_bases TTCCTGTGACTTCCCACGAAAGACTCCACTCAAACGTTCAATTGCGCTGCAGTGATCCGATTTTAGATCGCACTCGGGAT CTCGTTGCGCAAATCTACCT
Downstream 100 bases:
>100_bases CCCTACTCTTGTCCAGTACTTGTCTAAACTTGAATAGGTTACAATTAGCCCGATTCGGCATGCCAAATGAGAGCAAACCT ATGGACCATTTTTTACACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGLPTGAVILITSG
Sequences:
>Translated_71_residues MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGLPTGAVILITSG >Mature_71_residues MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGLPTGAVILITSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8338; Mature: 8338
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGL CCCCEEEEEEEECCHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCC PTGAVILITSG CCCEEEEEECC >Mature Secondary Structure MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGL CCCCEEEEEEEECCHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCC PTGAVILITSG CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA