Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227080337

Identifier: 227080337

GI number: 227080337

Start: 99152

End: 99367

Strand: Reverse

Name: 227080337

Synonym: VCM66_0101

Alternate gene names: NA

Gene position: 99367-99152 (Counterclockwise)

Preceding gene: 227080338

Following gene: 227080336

Centisome position: 3.44

GC content: 36.57

Gene sequence:

>216_bases
GTGGATAACTCTGTGATAAATTTCTTTATTCACTGTCATCAAACCGCCTATTTCAAGGCTTTATTACAATTCATCGATTG
GGGATACTTTCAAAATTACCCACAGCAAAATCAGGATCATCGCTACATATTGTGGATCGAAAATCACAAAACCACTTTAT
CAACGCAATTCACAGGATTACCCACAGGTGCTGTCATTTTAATCACAAGTGGATAA

Upstream 100 bases:

>100_bases
TTCCTGTGACTTCCCACGAAAGACTCCACTCAAACGTTCAATTGCGCTGCAGTGATCCGATTTTAGATCGCACTCGGGAT
CTCGTTGCGCAAATCTACCT

Downstream 100 bases:

>100_bases
CCCTACTCTTGTCCAGTACTTGTCTAAACTTGAATAGGTTACAATTAGCCCGATTCGGCATGCCAAATGAGAGCAAACCT
ATGGACCATTTTTTACACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGLPTGAVILITSG

Sequences:

>Translated_71_residues
MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGLPTGAVILITSG
>Mature_71_residues
MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGLPTGAVILITSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8338; Mature: 8338

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGL
CCCCEEEEEEEECCHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCC
PTGAVILITSG
CCCEEEEEECC
>Mature Secondary Structure
MDNSVINFFIHCHQTAYFKALLQFIDWGYFQNYPQQNQDHRYILWIENHKTTLSTQFTGL
CCCCEEEEEEEECCHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCC
PTGAVILITSG
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA