| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227080275
Identifier: 227080275
GI number: 227080275
Start: 36526
End: 36693
Strand: Reverse
Name: 227080275
Synonym: VCM66_0038
Alternate gene names: NA
Gene position: 36693-36526 (Counterclockwise)
Preceding gene: 227080278
Following gene: 227080274
Centisome position: 1.27
GC content: 52.38
Gene sequence:
>168_bases ATGCGCCCAACAACCGTCAGGTTTTCAAATACAAACCGTAGTGCAATGCGTCGCCGCAGTGGTTTTGCAGTGGCTCCCGT TGCGAAAAAAACAGCAACAGCCCCCACGCTGGTTGAAAGAAATGCGTTGACCGCATCCCCCGAAACCAAAGTGGTTCAGG CAGCTTAA
Upstream 100 bases:
>100_bases CAAAAGAGTGAATCTCGGTTACGTCCTGTACTCAAGAGCCACTCATAATGAGCCAGGGTGTAGCATCGGCAATGGATATG CCTGACAGTTAGGTTATGTC
Downstream 100 bases:
>100_bases TTGAAAAGCGCAGTAAAACCTGCGCTTTTTTCTTGCCCGCGAATTGGTATTGCTCAGCGCTTTTGGTACCTTTAGCCACA AATCACTATAAAAATTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MRPTTVRFSNTNRSAMRRRSGFAVAPVAKKTATAPTLVERNALTASPETKVVQAA
Sequences:
>Translated_55_residues MRPTTVRFSNTNRSAMRRRSGFAVAPVAKKTATAPTLVERNALTASPETKVVQAA >Mature_55_residues MRPTTVRFSNTNRSAMRRRSGFAVAPVAKKTATAPTLVERNALTASPETKVVQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5916; Mature: 5916
Theoretical pI: Translated: 12.64; Mature: 12.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTTVRFSNTNRSAMRRRSGFAVAPVAKKTATAPTLVERNALTASPETKVVQAA CCCCEEEECCCCHHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCEEEECC >Mature Secondary Structure MRPTTVRFSNTNRSAMRRRSGFAVAPVAKKTATAPTLVERNALTASPETKVVQAA CCCCEEEECCCCHHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA